Pre_GI: BLASTP Hits

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Query: NC_013929:5248000:5266955 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5266955, End: 5267167, Length: 213

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:4377000:439065243906524390861210Streptomyces coelicolor A3(2), complete genomeexcisionase1e-23108
NC_016114:3575955:357777535777753577996222Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeexcisionase9e-2198.6
NC_018750:4333064:433420943342094334418210Streptomyces venezuelae ATCC 10712, complete genomeexcisionase1e-1891.3
NC_014830:3438504:346213234621323462341210Intrasporangium calvum DSM 43043 chromosome, complete genomeDNA binding domain protein, excisionase family5e-1683.2
NC_013131:9903320:993026999302699930478210Catenulispora acidiphila DSM 44928, complete genomeDNA binding domain protein, excisionase family8e-1372.4
NC_015953:3456535:347326734732673473485219Streptomyces sp. SirexAA-E chromosome, complete genomeexcisionase family DNA binding domain-containing protein5e-0960.1