Pre_GI: BLASTP Hits

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Query: NC_013890:53538:72677 Dehalococcoides sp. GT chromosome, complete genome

Start: 72677, End: 75070, Length: 2394

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007644:626992:6652906652906678482559Moorella thermoacetica ATCC 39073, complete genomeDNA methylase N-4/N-61e-41172
NC_015146:144565:1542321542321560101779Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completeDNA methylase3e-34147
NC_009446:174951:1930391930391958282790Dichelobacter nodosus VCS1703A, complete genomeS-adenosyl-L-methionine-dependent methyltransferases family protein VrlL9e-32139
NC_015146:144565:1560101560101578451836Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completeDNA modification methylase8e-31135
NC_014844:1818939:1828192182819218309962805Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-30135
NC_010794:303203:3262153262153291092895Methylacidiphilum infernorum V4, complete genomeDNA modification methylase7e-27122
NC_008578:889907:9017649017649047422979Acidothermus cellulolyticus 11B, complete genomehypothetical protein2e-26121
NC_013522:1538994:1560232156023215634383207Thermanaerovibrio acidaminovorans DSM 6589, complete genomeDNA methylase N-4/N-6 domain protein3e-24114
NC_013665:918313:9689919689919705171527Methanocella paludicola SANAE, complete genomehypothetical protein8e-1996.3
NC_010296:5278081:5278081527808152803152235Microcystis aeruginosa NIES-843, complete genomehypothetical protein1e-1895.5
NC_011884:1541256:1557128155712815593472220Cyanothece sp. PCC 7425, complete genomeDNA methylase N-4/N-6 domain protein9e-1686.3
NC_007954:334795:3492043492043510031800Shewanella denitrificans OS217, complete genomeDNA methylase N-4/N-62e-1482
NC_014650:2969866:2982675298267529844621788Geobacillus sp. Y4.1MC1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein6e-1480.1
NC_013890:53538:718587185872637780Dehalococcoides sp. GT chromosome, complete genomehypothetical protein9e-1169.7
NC_014972:1126426:1140331114033111418451515Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-1067
NC_012032:398419:4104544104544116561203Chloroflexus sp. Y-400-fl, complete genomeDNA methylase N-4/N-6 domain protein2e-0965.1
NC_010175:398453:4104884104884116901203Chloroflexus aurantiacus J-10-fl, complete genomeDNA methylase N-4/N-6 domain protein2e-0965.1
NC_000909:1408276:1416977141697714185691593Methanocaldococcus jannaschii DSM 2661, complete genomemodification methylase, type II R/M system1e-0862.8
NC_009921:1736000:1751686175168617530771392Frankia sp. EAN1pec, complete genomeputative RNA methylase2e-0758.5
NC_015707:1394227:1408504140850414111912688Thermotoga thermarum DSM 5069 chromosome, complete genomehypothetical protein4e-0757.4
NC_006582:883922:8929238929238941341212Bacillus clausii KSM-K16, complete genomeadenine-specific DNA methylase6e-0757
NC_018604:1329228:1346064134606413476351572Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein5e-0757
NC_013364:928486:9380159380159393311317Escherichia coli O111:H- str. 11128, complete genomeputative methyltransferase1e-0655.8
NC_013353:922937:9324669324669337821317Escherichia coli O103:H2 str. 12009, complete genomemethyltransferase1e-0655.8
AP010958:922937:9324669324669337821317Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted methyltransferase1e-0655.8
NC_015434:2460053:247399824739982474741744Verrucosispora maris AB-18-032 chromosome, complete genomeDNA methylase n-4/n-6 domain-containing protein2e-0655.1
NC_010794:303203:3155503155503177452196Methylacidiphilum infernorum V4, complete genomeAdenine-specific DNA methylase containing a Zn-ribbon3e-0654.7
NC_018607:1134900:115173911517391152506768Brachyspira pilosicoli B2904 chromosome, complete genomemodification methylase5e-0653.5