Pre_GI: BLASTP Hits

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Query: NC_013890:53538:71858 Dehalococcoides sp. GT chromosome, complete genome

Start: 71858, End: 72637, Length: 780

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013890:53538:7267772677750702394Dehalococcoides sp. GT chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-1170.1
NC_014206:2516000:255816725581672558409243Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein4e-1168.9
NC_015680:1315040:1335654133565413368681215Pyrococcus yayanosii CH1 chromosome, complete genomehypothetical protein3e-1065.9
NC_015565:287900:317990317990318988999Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein2e-0963.2
NC_014377:1943476:194918719491871949993807Thermosediminibacter oceani DSM 16646 chromosome, complete genomeExcinuclease ABC C subunit domain protein6e-0858.2