Pre_GI: BLASTP Hits

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Query: NC_013890:1175931:1194681 Dehalococcoides sp. GT chromosome, complete genome

Start: 1194681, End: 1195673, Length: 993

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009973:77518:921039210393098996Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeregulatory protein, DeoR4e-36152
NC_013385:1758383:1772945177294517740031059Ammonifex degensii KC4, complete genomeHelix-turn-helix type 11 domain protein1e-33143
NC_019978:922978:938698938698939693996Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator2e-28126
NC_014960:1380500:1389942138994213931483207Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-27122
NC_015573:2323268:2338673233867323396831011Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometranscriptional regulator9e-26117
NC_010424:1356000:1368965136896513699751011Candidatus Desulforudis audaxviator MP104C, complete genomeregulatory protein, DeoR3e-25116
NC_013501:1881692:1906452190645219074951044Rhodothermus marinus DSM 4252, complete genomeHelix-turn-helix type 11 domain protein3e-25116
NC_009483:1116385:111783611178361118828993Geobacter uraniireducens Rf4 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein2e-25116
NC_015966:1316901:1317857131785713189001044Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein4e-23108
NC_012914:336750:336750336750337697948Paenibacillus sp. JDR-2, complete genomeHelix-turn-helix type 11 domain protein7e-23108
NC_015387:942974:948848948848949816969Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeputative transcriptional regulator7e-23108
NC_014973:3151701:3173941317394131749421002Geobacter sp. M18 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein4e-22105
NC_007775:723925:742311742311743219909Synechococcus sp. JA-3-3Ab, complete genomehypothetical protein6e-21101
NC_010546:1175979:119407511940751195073999Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein3e-1996.3
NC_011146:3206000:3208479320847932094801002Geobacter bemidjiensis Bem, complete genomeHelix-turn-helix type 11 domain protein7e-1995.1
NC_010803:483713:488375488375489355981Chlorobium limicola DSM 245, complete genomehypothetical protein5e-1892
NC_014364:1116439:1119415111941511204251011Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeregulatory protein, DeoR2e-1790.5
NC_009337:89631:1043701043701053951026Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein6e-1685.1
NC_012796:3600630:361913636191363620131996Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-1584
NC_015573:1045877:1062081106208110631961116Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometranscriptional regulator2e-1583.2
NC_007512:944941:9599929599929610471056Pelodictyon luteolum DSM 273, complete genomehypothetical protein2e-1583.2
NC_015573:2975000:2987424298742429884491026Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometranscriptional regulator-like protein3e-1582.8
NC_017098:477000:4811234811234821451023Spirochaeta africana DSM 8902 chromosome, complete genomeputative transcriptional regulator2e-1480.1
NC_013720:5769910:579703657970365797962927Pirellula staleyi DSM 6068, complete genomeHelix-turn-helix type 11 domain protein1e-1377.4
NC_012108:616088:619820619820620818999Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator, putative2e-1377
NC_015170:54000:5606956069570881020Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequencehypothetical protein7e-1375.1
NC_014484:447889:452094452094453080987Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein1e-1273.9
NC_015577:3589884:360730936073093608295987Treponema azotonutricium ZAS-9 chromosome, complete genomeHTH domain-containing protein4e-1272.8
NC_014551:2510000:253795525379552538917963Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-1067.8
NC_013889:2561381:256394725639472564906960Thioalkalivibrio sp. K90mix chromosome, complete genomeHelix-turn-helix type 11 domain protein2e-1066.6
NC_015321:4287945:429367142936714294360690Fluviicola taffensis DSM 16823 chromosome, complete genomeregulatory protein DeoR4e-1065.9
NC_016935:789849:798132798132799094963Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator DeoR5e-1065.5
NC_014639:1538782:157149115714911572453963Bacillus atrophaeus 1942 chromosome, complete genomeDeoR family transcriptional regulator5e-1065.5
CP002207:1538782:157149115714911572453963Bacillus atrophaeus 1942, complete genomeDeoR family transcriptional regulator5e-1065.5
NC_015690:790500:798606798606799568963Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator DeoR1e-0964.3
NC_007759:2748000:276304127630412764018978Syntrophus aciditrophicus SB, complete genometranscriptional regulator2e-0963.9
NC_014834:959986:975100975100975783684Rhodopseudomonas palustris DX-1 chromosome, complete genomeDeoR family transcriptional regulator2e-0963.5
NC_014836:993448:101097310109731011938966Desulfurispirillum indicum S5 chromosome, complete genometranscriptional regulator-like protein2e-0963.2
NC_015277:3351504:337463733746373375632996Sphingobacterium sp. 21 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein2e-0963.2
NC_014011:962474:962883962883963866984Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator protein-like protein3e-0962.8
NC_006350:1084930:1091418109141810924401023Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DeoR family regulatory protein4e-0962.4
NC_009337:89631:1064971064971075911095Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein6e-0962
NC_010830:1038292:106250910625091063198690Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein6e-0962
NC_008702:3375027:338766433876643388353690Azoarcus sp. BH72, complete genomeputative transcriptional regulator, deoR-family1e-0861.2
NC_013517:2413373:242886424288642429832969Sebaldella termitidis ATCC 33386, complete genomeHelix-turn-helix type 11 domain protein3e-0859.3
NC_015578:3694813:3704358370435837053891032Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein7e-0755.1
NC_016935:4233223:430075343007534301694942Paenibacillus mucilaginosus 3016 chromosome, complete genomehelix-turn-helix type 11 domain-containing protein9e-0754.7
NC_015690:4469775:454444845444484545389942Paenibacillus mucilaginosus KNP414 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein1e-0654.3
NC_013209:160892:1841071841071851081002Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein2e-0653.5
NC_017100:160892:1841071841071851081002Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein2e-0653.5
NC_017108:160892:1841071841071851081002Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein2e-0653.5
NC_017111:160892:1841071841071851081002Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein2e-0653.5
NC_017121:160892:1841071841071851081002Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein2e-0653.5
NC_017125:160892:1841071841071851081002Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein2e-0653.5
NC_017146:160892:1841071841071851081002Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein2e-0653.5
NC_017150:160892:1841071841071851081002Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein2e-0653.5
NC_007626:2204767:224993022499302250916987Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator2e-0653.1
NC_015508:296856:309754309754310737984Agrobacterium sp. H13-3 chromosome linear, complete sequenceDeoR family transcriptional regulator3e-0653.1