Pre_GI: BLASTP Hits

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Query: NC_013716:5020204:5044155 Citrobacter rodentium ICC168, complete genome

Start: 5044155, End: 5045567, Length: 1413

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015224:3892972:3933125393312539345341410Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,glucuronate isomerase0834
NC_015761:2982000:3004742300474230061541413Salmonella bongori NCTC 12419, complete genomeglucuronate isomerase0664
NC_016513:1761830:1765154176515417665571404Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeuronate isomerase0646
NC_015732:684000:6874976874976889331437Spirochaeta caldaria DSM 7334 chromosome, complete genomeUronate isomerase7e-154544
NC_014041:3197192:3210040321004032114071368Zunongwangia profunda SM-A87 chromosome, complete genomeuronate isomerase2e-148525
NC_014734:677103:6771036771036785091407Paludibacter propionicigenes WB4 chromosome, complete genomed-glucuronate isomerase3e-148525
NC_004193:375416:3906323906323920501419Oceanobacillus iheyensis HTE831, complete genomeuronate isomerase8e-146517
NC_014650:2097900:2103086210308621044981413Geobacillus sp. Y4.1MC1 chromosome, complete genomeglucuronate isomerase1e-145516
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome1e-145516
NC_020210:1908000:1927113192711319285281416Geobacillus sp. GHH01, complete genomeuronate isomerase3e-145515
NC_014206:1745203:1747673174767317490881416Geobacillus sp. C56-T3 chromosome, complete genomeglucuronate isomerase2e-144512
NS_000191:120700:1207001207001221061407Uncultured Termite group 1 bacterium phylotype Rs-D17, completeglucuronate isomerase4e-144511
NC_018607:921923:9316679316679330731407Brachyspira pilosicoli B2904 chromosome, complete genomeglucuronate isomerase5e-138491
NC_013061:1360081:1366206136620613676061401Pedobacter heparinus DSM 2366, complete genomeGlucuronate isomerase4e-137488
NC_014330:505412:5320035320035334091407Brachyspira pilosicoli 95/1000 chromosome, complete genomeglucuronate isomerase5e-135481
NC_019908:121178:1313551313551327611407Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglucuronate isomerase5e-135481
NC_012225:2523262:2543374254337425447801407Brachyspira hyodysenteriae WA1, complete genomeglucuronate isomerase1e-134480
NC_015277:689519:7087947087947101971404Sphingobacterium sp. 21 chromosome, complete genomeUronate isomerase4e-134478
NC_013171:1731491:1740191174019117415971407Anaerococcus prevotii DSM 20548, complete genomeGlucuronate isomerase1e-131470
NC_007168:2631535:2652903265290326543061404Staphylococcus haemolyticus JCSC1435, complete genomeuronate isomerase1e-122439
NC_015389:616430:6516556516556530641410Coriobacterium glomerans PW2 chromosome, complete genomeD-glucuronate isomerase1e-110400
NC_007517:480303:4974034974034988241422Geobacter metallireducens GS-15, complete genomeuronate isomerase7e-92338
NC_013744:462520:4731854731854745491365Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeGlucuronate isomerase3e-68259
NC_015064:2421034:2421034242103424224431410Acidobacterium sp. MP5ACTX9 chromosome, complete genomeGlucuronate isomerase3e-41169
NC_015588:475723:4931754931754945931419Isoptericola variabilis 225 chromosome, complete genomeGlucuronate isomerase2e-38160
NC_020911:18500:3478934789361951407Octadecabacter antarcticus 307, complete genomeputative uronate isomerase1e-37157
NC_014666:6940532:6941896694189669433501455Frankia sp. EuI1c chromosome, complete genomeGlucuronate isomerase5e-35149
NC_013174:2564979:2573824257382425752181395Jonesia denitrificans DSM 20603, complete genomeGlucuronate isomerase1e-27124