Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3544073 Citrobacter rodentium ICC168, complete genome

Start: 3544073, End: 3544681, Length: 609

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:3328844:334386933438693344477609Enterobacter aerogenes EA1509E, complete genomehypothetical protein4e-71267
NC_007005:1636875:164492416449241645634711Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein9e-1167
NC_016845:4539381:454330645433064544046741Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-1065.9
NC_015566:316340:328852328852329595744Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-0858.9
NC_015567:313035:329017329017329760744Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-0858.9
NC_014029:331919:359039359039359782744Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-0858.5
NC_004547:611178:622423622423623298876Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein6e-0857.4
NC_009832:358291:374398374398375141744Serratia proteamaculans 568, complete genomehypothetical protein1e-0756.2
NC_011992:1234610:123809312380931238734642Acidovorax ebreus TPSY, complete genomeputative secreted protein3e-0755.1
NC_012912:483390:517267517267517917651Dickeya zeae Ech1591, complete genomehypothetical protein3e-0755.1
NC_010002:4544818:455826945582694558910642Delftia acidovorans SPH-1, complete genomehypothetical protein2e-0652.4
NC_010170:4533416:453748945374894538130642Bordetella petrii, complete genomehypothetical protein2e-0652.4
NC_006513:1379735:146096514609651461618654Azoarcus sp. EbN1, complete genomehypothetical protein6e-0650.8
NC_015379:2417312:245220024522002452871672Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-0650.8