Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3543416 Citrobacter rodentium ICC168, complete genome

Start: 3543416, End: 3544066, Length: 651

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:3328844:334448433444843345134651Enterobacter aerogenes EA1509E, complete genomeFIG00509784: hypothetical protein5e-106383
NC_012731:600518:618067618067618741675Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-57221
NC_005126:1223042:124369012436901244427738Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-51200
NC_016845:4539381:454257545425754543192618Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein9e-51199
NC_004547:611178:623308623308624021714Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein9e-47186
NC_016830:3869572:392636039263603927079720Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein3e-46184
NC_007005:1636875:164416916441691644915747Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein5e-45181
NC_014029:331919:359793359793360503711Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-44177
NC_013892:3278647:329886132988613299559699Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein6e-44177
NC_013892:1483000:149761214976121498307696Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-43176
NC_006513:1379735:146021714602171460954738Azoarcus sp. EbN1, complete genomehypothetical protein1e-43176
NC_014228:3391500:342173034217303422425696Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-44176
NC_009708:4182460:419880341988034199621819Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein8e-44176
NC_008752:558828:573957573957574715759Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-43174
NC_009832:358291:375152375152375862711Serratia proteamaculans 568, complete genomehypothetical protein6e-43173
NC_015566:316340:329606329606330316711Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein6e-43173
NC_015567:313035:329771329771330481711Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein6e-43173
NC_009656:4527457:462704246270424627794753Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-42171
NC_018080:5091772:515204751520475152802756Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-42171
NC_012691:2614603:265614726561472656875729Tolumonas auensis DSM 9187, complete genomeputative secreted protein1e-40166
NC_010170:1498253:153197015319701532689720Bordetella petrii, complete genomeconserved protein, putatively exported8e-41166
NC_012912:483390:516548516548517255708Dickeya zeae Ech1591, complete genomeputative secreted protein5e-40164
NC_009138:1974935:201147420114742012199726Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide9e-40163
NC_010002:4544818:455892545589254559662738Delftia acidovorans SPH-1, complete genomeputative secreted protein5e-39160
NC_010170:4533416:453673745367374537474738Bordetella petrii, complete genomeconserved protein, putatively exported5e-39160
NC_003919:2639080:263833126383312639095765Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein7e-39160
NC_015379:2417312:245149924514992452218720Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein2e-37155
NC_008344:49039:975669756698294729Nitrosomonas eutropha C91, complete genomehypothetical protein6e-36150
NC_014532:3555550:357296335729633573721759Halomonas elongata DSM 2581, complete genomehypothetical protein2e-35149
NC_011992:1234610:123735312373531238078726Acidovorax ebreus TPSY, complete genomeputative secreted protein5e-34144
NC_008825:2525380:254304225430422543761720Methylibium petroleiphilum PM1, complete genomehypothetical protein4e-33141
NC_004129:5373886:542344454234445424187744Pseudomonas fluorescens Pf-5, complete genomehypothetical protein8e-33140
NC_008782:2326439:234563123456312346350720Acidovorax sp. JS42, complete genomeputative secreted protein1e-32139
NC_015422:1876102:187539818753981876117720Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein4e-32137
NC_011662:1058794:106209410620941062813720Thauera sp. MZ1T, complete genomehypothetical protein2e-31135
NC_015572:2186394:219760721976072198383777Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein3e-31134
NC_007484:667879:676468676468677286819Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein4e-24111
NC_008739:41793:417934179342569777Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencehypothetical protein5e-22104