Pre_GI: BLASTP Hits

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Query: NC_013716:3512950:3521073 Citrobacter rodentium ICC168, complete genome

Start: 3521073, End: 3521366, Length: 294

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:4677412:468401946840194684312294Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein7e-46182
NC_010067:3056774:307180930718093072162354Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-43173
NC_012962:3864000:387315338731533873449297Photorhabdus asymbiotica, complete genomehypothetical protein2e-1064.3
NC_012731:560199:582356582356582757402Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-0857.4
NC_012125:4536383:454971545497154550011297Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0651.2
NC_016832:4425330:443862744386274438923297Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-0650.8
NC_003198:4453457:446675444667544467050297Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-0650.8