Pre_GI: BLASTP Hits

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Query: NC_013716:3327881:3360371 Citrobacter rodentium ICC168, complete genome

Start: 3360371, End: 3362296, Length: 1926

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010505:5525461:5525461552546155273861926Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein6e-94345
NC_018750:6192970:6206183620618362082672085Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein3e-21103
NC_017506:1222000:1239875123987512413591485Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein2e-20101
NC_014815:4385759:4405647440564744076772031Micromonospora sp. L5 chromosome, complete genomehypothetical protein3e-1480.5
NC_003888:3893187:3902381390238139045012121Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-1170.9
NC_014151:449732:4596134596134616192007Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein8e-1066.2