Pre_GI: BLASTP Hits

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Query: NC_013716:2898434:2906192 Citrobacter rodentium ICC168, complete genome

Start: 2906192, End: 2907142, Length: 951

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015138:5342473:535903053590305360022993Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeMarR family transcriptional regulator with acetyltransferase activity2e-67256
NC_015723:589727:601696601696602664969Cupriavidus necator N-1 chromosome 2, complete sequenceMarR family transcriptional regulator1e-66253
NC_020209:1949500:196181119618111962251441Pseudomonas poae RE*1-1-14, complete genomeMarR family transcriptional regulator4e-52205
NC_014318:10070730:100952681009526810096197930Amycolatopsis mediterranei U32 chromosome, complete genomeMarR family transcriptional regulator1e-30134
NC_016047:345491:344577344577345494918Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein5e-25115
NC_009725:496443:530225530225531130906Bacillus amyloliquefaciens FZB42, complete genomeYbfA7e-24111
NC_017191:467207:477480477480478385906Bacillus amyloliquefaciens XH7 chromosome, complete genomeN-Acyltransferase3e-23108
NC_017188:461177:471458471458472363906Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein3e-23108
NC_012997:4906423:490910249091024909578477Teredinibacter turnerae T7901, complete genomeMarR-family transcriptional regulator1e-22107
NC_015416:223968:244838244838245338501Methanosaeta concilii GP-6 chromosome, complete genomeacetyltransferase4e-22105
NC_003552:1008475:100960110096011010161561Methanosarcina acetivorans C2A, complete genomeN-acetyltransferase3e-2099.4
NC_015416:223968:244324244324244824501Methanosaeta concilii GP-6 chromosome, complete genomeN-acetyltransferase3e-1995.9
NC_009921:5202607:523541352354135235904492Frankia sp. EAN1pec, complete genomeGCN5-related N-acetyltransferase1e-1687.8
NC_014623:10036628:100420131004201310042516504Stigmatella aurantiaca DW4/3-1 chromosome, complete genometranscriptional regulator7e-1065.1
NC_014364:2246524:228054122805412281413873Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, MarR family with acetyltransferase activity4e-0755.8
NC_015660:1869962:188270518827051883151447Geobacillus thermoglucosidasius C56-YS93 chromosome, completeMarR family transcriptional regulator5e-0755.5
NC_014334:2696000:269875926987592699256498Lactobacillus casei str. Zhang chromosome, complete genomeGNAT family acetyltransferase9e-0754.7
NC_011969:4396000:440300244030024403493492Bacillus cereus Q1 chromosome, complete genomeiaa acetyltransferase6e-0651.6