Pre_GI: BLASTP Hits

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Query: NC_013716:2476334:2493915 Citrobacter rodentium ICC168, complete genome

Start: 2493915, End: 2494676, Length: 762

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016745:2913712:293420529342052934966762Oceanimonas sp. GK1 chromosome, complete genomeprotein CysZ2e-61235
NC_008260:1044440:106178510617851062651867Alcanivorax borkumensis SK2, complete genomecysZ family protein, putative7e-30130
NC_018691:1864796:189541918954191896195777Alcanivorax dieselolei B5 chromosome, complete genomeCysZ family protein, putative2e-27123
NC_008095:7172047:719871471987147199532819Myxococcus xanthus DK 1622, complete genomehypothetical protein4e-0961.6
NC_013410:2691437:271232727123272713103777Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein7e-0754.3