Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:1918664:1923472 Citrobacter rodentium ICC168, complete genome

Start: 1923472, End: 1923750, Length: 279

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:1116148:113623211362321136510279Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-33140
NC_015663:3586836:360405236040523604327276Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-30129
NC_021066:839734:866057866057866332276Raoultella ornithinolytica B6, complete genomehypothetical protein1e-29128
NC_014121:1589389:161118216111821611457276Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-29127
NC_016514:2713834:271875027187502719025276Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YchH2e-29127
NC_014618:2139639:215739921573992157674276Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-28125
NC_013508:1491945:151102115110211511299279Edwardsiella tarda EIB202, complete genomehypothetical protein3e-25113
NC_015224:2095816:211595221159522116224273Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein6e-25112
NC_020064:2697116:270421727042172704498282Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF2583)2e-24111
NC_003198:1771432:180222218022221802443222Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-21101
NC_012214:2221702:222408522240852224369285Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein5e-2096.3
NC_014500:2479814:248742224874222487691270Dickeya dadantii 3937 chromosome, complete genomeputative inner membrane protein5e-1992.8
NC_013971:1660144:170465017046501704937288Erwinia amylovora ATCC 49946 chromosome, complete genomemembrane protein1e-1891.7
NC_013961:1622616:166712316671231667410288Erwinia amylovora, complete genomeUncharacterized protein ychH1e-1891.7
NC_004547:2470978:248835224883522488621270Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-1787
NC_013421:2613137:261736926173692617638270Pectobacterium wasabiae WPP163, complete genomeProtein of unknown function DUF25832e-1684.7
NC_016816:2684336:268973826897382689977240Pantoea ananatis LMG 5342, complete genomehypothetical protein2e-1684.3