Pre_GI: BLASTP Hits

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Query: NC_013716:1138441:1151862 Citrobacter rodentium ICC168, complete genome

Start: 1151862, End: 1152482, Length: 621

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013517:483531:503838503838504458621Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, Crp/Fnr family1e-101368
NC_009922:2556033:255710525571052557773669Alkaliphilus oremlandii OhILAs, complete genomecyclic nucleotide-binding protein2e-0962.4
NC_014614:432000:435932435932436606675Clostridium sticklandii, complete genomeCyclic nucleotide-binding protein1e-0756.2
NC_014393:1221000:122334312233431224026684Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, Crp/Fnr family7e-0753.9
NC_008261:381297:397452397452398123672Clostridium perfringens ATCC 13124, complete genomecyclic nucleotide-binding domain protein9e-0753.5
NC_020409:437781:497477497477498151675Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, Crp/Fnr family2e-0652.4