Pre_GI: BLASTP Hits

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Query: NC_013552:68003:68003 Dehalococcoides sp. VS, complete genome

Start: 68003, End: 68743, Length: 741

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007356:202131:221047221047221787741Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein4e-124443
NC_013552:68003:941989419894947750Dehalococcoides sp. VS, complete genomeradical SAM domain protein2e-47189
NC_007356:51080:788437884379592750Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein4e-47187
NC_009455:273519:292229292229292978750Dehalococcoides sp. BAV1 chromosome, complete genomeradical SAM domain-containing protein7e-47187
NC_007356:1221500:124335412433541244211858Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein1e-37156
NC_002936:67896:872348723488049816Dehalococcoides ethenogenes 195, complete genomeradical SAM domain protein4e-35147
NC_007356:1221500:124420812442081244966759Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein9e-35147
NC_002936:67896:863868638687237852Dehalococcoides ethenogenes 195, complete genomeradical SAM domain protein3e-34145
NC_007356:202131:217919217919218665747Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein2e-32139
NC_014314:1:144571445715236780Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeradical SAM domain-containing protein8e-32137
NC_013552:68003:711257112571871747Dehalococcoides sp. VS, complete genomeradical SAM domain protein2e-30132
NC_007356:202131:219395219395220231837Dehalococcoides sp. CBDB1, complete genomeradical SAM domain protein2e-30132
NC_013552:68003:695586955870382825Dehalococcoides sp. VS, complete genomeradical SAM domain protein5e-30131
NC_008701:1310857:133341813334181334218801Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein2e-1789.4
NC_013156:1240926:125357012535701254259690Methanocaldococcus fervens AG86, complete genomeRadical SAM domain protein1e-1067