Pre_GI: BLASTP Hits

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Query: NC_013410:3105121:3105121 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3105121, End: 3106119, Length: 999

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008740:1459747:146835714683571469292936Marinobacter aquaeolei VT8, complete genomemetallophosphoesterase2e-50199
NC_014008:1463795:1473615147361514750331419Coraliomargarita akajimensis DSM 45221 chromosome, complete genomemetallophosphoesterase4e-47188
NC_015576:612164:673900673900674880981Mycobacterium sp. JDM601 chromosome, complete genomeSer/Thr protein phosphatase family protein4e-43175
NC_016609:8772011:8787455878745587900072553Niastella koreensis GR20-10 chromosome, complete genomebis(5'-nucleosyl)-tetraphosphatase1e-1273.9
NC_016627:841269:8536848536848562962613Clostridium clariflavum DSM 19732 chromosome, complete genomepolynucleotide 3'-phosphatase,polynucleotide 5'-hydroxyl-kinase,polynucleotide 2',3'-cyclic phosphate phosphodiesterase2e-1170.5
NC_013406:2866000:290677229067722907500729Paenibacillus sp. Y412MC10 chromosome, complete genomemetallophosphoesterase1e-1067.8
NC_001263:2236777:2241447224144722427271281Deinococcus radiodurans R1 chromosome 1, complete sequenceprotein serine-threonine phosphatase, putative1e-1067.8
NC_015577:3589884:3616483361648336191672685Treponema azotonutricium ZAS-9 chromosome, complete genomemetallophosphoesterase2e-1066.6
NC_014410:2149886:215750321575032158246744Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,bis(5'nucleosyl)-tetraphosphatase, ApaH3e-0756.2
NC_008278:296526:3006293006293033312703Frankia alni ACN14a, complete genomeserine/threonine protein phosphatase3e-0756.2
NC_015555:693461:706313706313707050738Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeBis(5'-nucleosyl)-tetraphosphatase (asymmetrical)1e-0654.3
NC_008347:174000:1747101747101772682559Maricaulis maris MCS10, complete genomemetallophosphoesterase1e-0654.3
NC_019970:2190695:220131522013152202058744Thermoanaerobacterium thermosaccharolyticum M0795, complete genomediadenosine tetraphosphatase4e-0652.8