Pre_GI: BLASTP Hits

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Query: NC_013410:2519441:2531055 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2531055, End: 2531921, Length: 867

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011059:1896593:192260619226061923439834Prosthecochloris aestuarii DSM 271, complete genomeglycosyl transferase family 21e-20100
NC_010483:273080:285779285779286678900Thermotoga sp. RQ2, complete genomeglycosyl transferase family 22e-1790.1
NC_019940:3341794:335627233562723357225954Thioflavicoccus mobilis 8321 chromosome, complete genomeglycosyltransferase4e-1375.5
NC_010999:2155714:216296721629672163833867Lactobacillus casei, complete genomePutative rhamnosyl transferase6e-1271.6
NC_004129:2234851:224853122485312249430900Pseudomonas fluorescens Pf-5, complete genomeglycosyl transferase, group 2 family protein1e-1170.5
NC_015311:1612366:162440016244001625170771Prevotella denticola F0289 chromosome, complete genomeglycosyltransferase group 2 family protein2e-1169.7
NC_016070:1178462:1196461119646111974891029Thermoproteus tenax Kra 1, complete genomeglycosyltransferase5e-1168.6
NC_020304:3751710:376000937600093760938930Desulfocapsa sulfexigens DSM 10523, complete genomeputative glycosyltransferase6e-1168.2
NC_009617:5545477:554828055482805549149870Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeglycosyl transferase family protein1e-1067.4
NC_016935:634500:659705659705660568864Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 2 glycosyl transferase1e-1067.4
NC_007512:1539095:154635215463521547326975Pelodictyon luteolum DSM 273, complete genomeglycosyl transferase, group 2 family1e-1067
NC_015500:2197000:220674122067412207694954Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase family 23e-1065.9
NC_013757:368973:379348379348380301954Geodermatophilus obscurus DSM 43160, complete genomeglycosyl transferase family 21e-0963.9
NC_014160:539347:547828547828548580753Thermosphaera aggregans DSM 11486 chromosome, complete genomefamily 2 glycosyltransferase3e-0962.8
NC_005125:3981987:399854139985413999377837Gloeobacter violaceus PCC 7421, complete genomeprobable glucosyltransferase3e-0962.8
NC_015731:447411:451561451561452520960Nitrosomonas sp. Is79A3 chromosome, complete genomeglycosyl transferase family 24e-0962.4
NC_011978:15059:245972459725520924Thermotoga neapolitana DSM 4359, complete genomeGlycosyl transferase, family 23e-0962.4
NC_013967:1878045:189585218958521896775924Haloferax volcanii DS2 chromosome, complete genomerhamnosyl transferase homolog9e-0961.2
NC_014961:412982:4153024153024164261125Desulfurococcus mucosus DSM 2162 chromosome, complete genomefamily 2 glycosyl transferase3e-0859.3
NC_015680:1562535:157298815729881573965978Pyrococcus yayanosii CH1 chromosome, complete genomefamily 2 glycosyl transferase5e-0858.5
NC_016884:2194419:221097222109722211805834Sulfobacillus acidophilus DSM 10332 chromosome, complete genomefamily 2 glycosyl transferase1e-0757.4
NC_015757:1329012:133922013392201340053834Sulfobacillus acidophilus TPY chromosome, complete genomeglycosyltransferase, group 1 family protein1e-0757.4
NC_013665:231023:239170239170240123954Methanocella paludicola SANAE, complete genomeputative glycosyltransferase1e-0757.4
NC_009523:5298488:530495453049545305886933Roseiflexus sp. RS-1 chromosome, complete genomeglycosyl transferase family protein4e-0755.8
NC_015164:63590:703187031871127810Bacteroides salanitronis DSM 18170 chromosome, complete genomeglycosyl transferase family 23e-0755.8
NC_015416:1039144:1044423104442310455171095Methanosaeta concilii GP-6 chromosome, complete genomeglycosyltransferase4e-0755.5
NC_009615:1469642:150580415058041506727924Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein6e-0755.1
NC_014408:682689:6921116921116931241014Methanothermobacter marburgensis str. Marburg chromosome, completeglycosyltransferase2e-0653.5
NC_001264:28266:426324263243447816Deinococcus radiodurans R1 chromosome 2, complete sequencerhamnosyltransferase, putative2e-0653.1
NC_009712:1822375:182800918280091828911903Candidatus Methanoregula boonei 6A8, complete genomeglycosyl transferase family protein2e-0653.1
NC_013740:660880:672220672220673170951Acidaminococcus fermentans DSM 20731, complete genomeglycosyl transferase family 28e-0651.2