Pre_GI: BLASTP Hits

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Query: NC_013410:2519441:2523715 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2523715, End: 2525049, Length: 1335

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015160:612000:6254006254006267311332Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein1e-123443
NC_014644:1456689:1468675146867514701201446Gardnerella vaginalis ATCC 14019 chromosome, complete genomeATPase8e-118424
NC_015160:1786350:1786350178635017876961347Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein6e-110397
NC_013714:2086526:2138938213893821402991362Bifidobacterium dentium Bd1, complete genomehypothetical protein1e-56221
NC_017219:2646157:2693549269354926948651317Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-36153
NC_011593:2650156:2697548269754826988641317Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein3e-36153
NC_014824:133065:1496881496881510431356Ruminococcus albus 7 plasmid pRUMAL01, complete sequenceputative AAA+ superfamily ATPase3e-36152
NC_010278:860165:8713968713968726881293Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,putative ATPase4e-35149
NC_009053:895965:9078719078719091991329Actinobacillus pleuropneumoniae L20, complete genomeputative ATPase2e-34147
NC_015500:1236874:1251451125145112527641314Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein2e-33144
NC_004663:2509433:2526658252665825279471290Bacteroides thetaiotaomicron VPI-5482, complete genomeconserved hypothetical protein, putative ATPase8e-33141
NC_014656:1161188:1192981119298111943511371Bifidobacterium longum subsp. longum BBMN68 chromosome, completeaaa+ superfamily atpase3e-32139
NC_008942:1198000:1210739121073912120761338Methanocorpusculum labreanum Z, complete genomehypothetical protein8e-32138
NC_015172:1002872:1008002100800210093361335Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein8e-30132
NC_013721:820852:8420568420568433931338Gardnerella vaginalis 409-05, complete genomehypothetical protein6e-29129
NC_015160:2664613:2684306268430626856191314Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative ATPase8e-29128
NC_009614:978506:9971589971589984561299Bacteroides vulgatus ATCC 8482 chromosome, complete genomeATPase1e-28127
NC_007907:2879568:2897180289718028984901311Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-28127
NC_011830:3904034:3924576392457639258891314Desulfitobacterium hafniense DCB-2, complete genomehypothetical protein9e-28125
NC_013410:1591500:1610607161060716119291323Fibrobacter succinogenes subsp. succinogenes S85 chromosome,ATPase4e-26119
NC_014363:1902868:1906581190658119078071227Olsenella uli DSM 7084 chromosome, complete genome9e-26118
NC_013165:413098:4407804407804421111332Slackia heliotrinireducens DSM 20476, complete genomepredicted ATPase (AAA+ superfamily)2e-25117
NC_015164:3210885:3231923323192332333261404Bacteroides salanitronis DSM 18170 chromosome, complete genomeputative ATP-binding protein5e-2099.4
NC_014216:2097500:2115705211570521170481344Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeNERD domain protein3e-1893.6
NC_010995:4460413:4463970446397044652861317Cellvibrio japonicus Ueda107, complete genomehypothetical protein1e-1791.7
NC_016901:414670:4158894158894172111323Shewanella baltica OS678 chromosome, complete genomehypothetical protein2e-1584.3
NC_009997:415808:4170274170274183491323Shewanella baltica OS195, complete genomehypothetical protein2e-1584.3
NC_007645:6461267:6469247646924764705601314Hahella chejuensis KCTC 2396, complete genomepredicted ATPase (AAA+ superfamily)1e-1481.3
NC_009654:894492:9002129002129015401329Marinomonas sp. MWYL1, complete genomehypothetical protein3e-1377
NC_017218:31247:450894508945787699Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein6e-1272.4