Pre_GI: BLASTP Hits

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Query: NC_013410:2253631:2274816 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2274816, End: 2275109, Length: 294

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002967:1589069:162163116216311621888258Treponema denticola ATCC 35405, complete genomeDNA-damage-inducible protein J, putative3e-1064.3
NC_015437:27325:735947359473863270Selenomonas sputigena ATCC 35185 chromosome, complete genomeaddiction module antitoxin, RelB/DinJ family4e-0753.5
NC_014824:366000:366413366413367057645Ruminococcus albus 7 plasmid pRUMAL01, complete sequenceaddiction module antitoxin, RelB/DinJ family5e-0753.1
NC_002967:552000:558535558535558807273Treponema denticola ATCC 35405, complete genomeDNA-damage-inducible protein J, putative2e-0651.2
NC_007384:278810:296389296389296649261Shigella sonnei Ss046, complete genomedamage-inducible protein J3e-0650.8
NC_013895:117429:141125141125141439315Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeputative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein4e-0650.4
NC_015873:1557999:156784515678451568024180Megasphaera elsdenii DSM 20460, complete genomeDNA damage-inducible protein4e-0650.1
NC_014644:1275038:128508612850861285415330Gardnerella vaginalis ATCC 14019 chromosome, complete genometoxin-antitoxin system5e-0649.7