Pre_GI: BLASTP Hits

Some Help

Query: NC_013410:2037840:2063768 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2063768, End: 2064328, Length: 561

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015873:380485:380485380485381042558Megasphaera elsdenii DSM 20460, complete genomehypothetical protein7e-31133
NC_015152:1602412:162128616212861621876591Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein5e-29127
NC_014624:2549219:255934625593462559909564Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein8e-27119
NC_015977:2280834:228819922881992288828630Roseburia hominis A2-183 chromosome, complete genomehypothetical protein1e-1789.4
NC_004557:806878:828628828628829236609Clostridium tetani E88, complete genomehypothetical protein1e-1376.3
NC_011979:773673:792386792386793171786Geobacter sp. FRC-32, complete genomehypothetical protein4e-1167.4