Pre_GI: BLASTP Hits

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Query: NC_013410:155236:171132 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 171132, End: 171446, Length: 315

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012778:1946924:195968819596881960002315Eubacterium eligens ATCC 27750, complete genomehypothetical protein5e-29125
NC_013192:374000:383275383275383604330Leptotrichia buccalis DSM 1135, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein8e-29125
NC_009617:4805413:482431048243104824627318Clostridium beijerinckii NCIMB 8052 chromosome, complete genome4Fe-4S ferredoxin1e-28124
NC_018664:2638102:264653626465362646850315Clostridium acidurici 9a chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein2e-27120
NC_017295:95919:116026116026116340315Clostridium acetobutylicum EA 2018 chromosome, complete genomeFerredoxin4e-27119
NC_015687:95918:116025116025116339315Clostridium acetobutylicum DSM 1731 chromosome, complete genomeferredoxin4e-27119
NC_003030:95918:116025116025116339315Clostridium acetobutylicum ATCC 824, complete genomeFerredoxin4e-27119
NC_015275:53871:640296402964343315Clostridium lentocellum DSM 5427 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein3e-22103
NC_014634:28690:361333613336447315Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence4Fe-4S ferredoxin iron-sulfur binding domain protein4e-2199.8
NC_014972:847099:854642854642855067426Desulfobulbus propionicus DSM 2032 chromosome, complete genomedissimilatory adenylylsulfate reductase subunit beta2e-1064.3
NC_015589:814530:839872839872840177306Desulfotomaculum ruminis DSM 2154 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein6e-1062.8
NC_009465:90000:100417100417100896480Candidatus Vesicomyosocius okutanii HA, complete genomeadenylylsulfate reductase beta subunit2e-0961.2
NC_011296:1750771:176097617609761761404429Thermodesulfovibrio yellowstonii DSM 11347, complete genomeadenylylsulfate reductase, beta subunit2e-0857.8
NC_006138:1245944:124594412459441246360417Desulfotalea psychrophila LSv54, complete genomeadenylylsulphate reductase, beta subunit (AprB)4e-0857
NC_019940:1309359:132021713202171320699483Thioflavicoccus mobilis 8321 chromosome, complete genomeadenosine phosphosulfate reductase subunit beta7e-0855.8
NC_013959:1723037:172834717283471728829483Sideroxydans lithotrophicus ES-1 chromosome, complete genomeadenylylsulfate reductase, beta subunit2e-0754.7
NC_005791:1626448:1632705163270516338561152Methanococcus maripaludis S2, complete genomepolyferredoxin, associated with F420-non-reducing hydrogenase1e-0652
NC_015636:832224:8392688392688404281161Methanothermococcus okinawensis IH1 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein1e-0652
NC_015562:899030:9373779373779385821206Methanotorris igneus Kol 5 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein1e-0651.6
NC_015499:1640500:165099916509991651436438Thermodesulfobium narugense DSM 14796 chromosome, complete genomeadenylylsulfate reductase, beta subunit2e-0651.2
NC_015320:1399589:1405663140566314076421980Archaeoglobus veneficus SNP6 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein3e-0650.4
NC_013741:1068170:108031410803141080766453Archaeoglobus profundus DSM 5631, complete genomeadenylylsulfate reductase, beta subunit4e-0650.1
NC_016885:809000:852828852828853322495Pyrobaculum oguniense TE7 chromosome, complete genomeadenosine phosphosulfate reductase, beta subunit4e-0650.1
NC_009635:1283830:1287142128714212883381197Methanococcus aeolicus Nankai-3 chromosome, complete genome4Fe-4S ferredoxin6e-0649.7
NC_010510:409469:420999420999421232234Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete4Fe-4S ferredoxin iron-sulfur binding domain protein5e-0649.7
NC_007503:1111457:113439011343901135007618Carboxydothermus hydrogenoformans Z-2901, complete genomeiron-sulfur cluster-binding protein5e-0649.7
NC_014632:113420:1309721309721320721101Ilyobacter polytropus DSM 2926 chromosome, complete genomedihydroorotate dehydrogenase family protein5e-0649.7
NC_009975:917337:9285489285489297351188Methanococcus maripaludis C6, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein5e-0649.7
NC_009634:1002295:1009763100976310109501188Methanococcus vannielii SB chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein6e-0649.3
NC_009637:920423:9272049272049283911188Methanococcus maripaludis C7 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain-containing protein7e-0649.3
NC_015589:2846000:2869856286985628709591104Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein7e-0649.3
NC_013407:1478811:1489190148919014903651176Methanocaldococcus vulcanius M7, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein9e-0648.9
NC_009135:1654131:1665790166579016669771188Methanococcus maripaludis C5, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein9e-0648.9