Pre_GI: BLASTP Hits

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Query: NC_013316:2033906:2082284 Clostridium difficile R20291, complete genome

Start: 2082284, End: 2083513, Length: 1230

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012781:700226:7232517232517248311581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein0697
NC_012781:2552723:2573928257392825755081581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein0697
NC_015977:3424178:3466782346678234680711290Roseburia hominis A2-183 chromosome, complete genomehypothetical protein3e-59229
NC_013316:2033906:2054064205406420555151452Clostridium difficile R20291, complete genome5e-46185
NC_012891:1277966:1292370129237012938541485Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein3e-40166
NC_014828:541874:5560295560295574741446Ethanoligenens harbinense YUAN-3 chromosome, complete genome4e-40165
NC_007296:1073784:1085573108557310868021230Streptococcus pyogenes MGAS6180, complete genomenickase8e-30131
NC_015603:1:17117122312061Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequencenickase5e-24112
NC_015977:2718437:2735594273559427373151722Roseburia hominis A2-183 chromosome, complete genomeputative conjugal transfer protein6e-1479
NC_017202:56000:7778377783798792097Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127,Nickase TraA3e-1376.6
NC_015977:2920500:2926700292670029284211722Roseburia hominis A2-183 chromosome, complete genomeputative conjugal transfer protein3e-1376.6
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA6e-1065.9
NC_008435:1131242:1160526116052611635463021Rhodopseudomonas palustris BisA53, complete genomeMobA/MobL protein9e-1065.1
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-0964.3
NC_007925:1085500:1087177108717710902813105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein2e-0963.9
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein4e-0963.2
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein9e-0962
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA2e-0860.8
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-0860.8
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-0860.5
NC_016831:947281:9714039714039729231521Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Conjugal transfer protein4e-0859.7
NC_011274:2044000:2061616206161620631361521Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91Conjugal transfer protein4e-0859.7
NC_011294:2053991:2070488207048820720081521Salmonella enterica subsp. enterica serovar Enteritidis strconjugal transfer protein4e-0859.3
NC_011205:2180598:2197505219750521990251521Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853MobA/MobL family protein4e-0859.3
NC_016832:948029:9618499618499633601512Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,MobA/MobL5e-0859.3
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA6e-0859.3
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA7e-0858.9
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA8e-0858.5
NC_004431:2185750:2201204220120422027061503Escherichia coli CFT073, complete genomehypothetical protein9e-0858.5
NC_008253:1938975:1954359195435919558611503Escherichia coli 536, complete genomehypothetical protein9e-0858.5
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA3e-0757
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA3e-0757
NC_015259:3902136:3902136390213639042412106Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTi-type conjugative transfer relaxase TraA7e-0755.5
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA8e-0755.5
NC_011745:2209288:2252468225246822539491482Escherichia coli ED1a chromosome, complete genomeputative mobilization protein8e-0755.5
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA1e-0655.1
NC_010125:2295500:2301968230196823033711404Gluconacetobacter diazotrophicus PAl 5, complete genomeputative mobilization protein A1e-0654.7
NC_011365:502620:5087915087915101941404Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeMobA/MobL protein1e-0654.7
NC_004547:1873390:1909271190927119107311461Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable plasmid-related protein2e-0653.9
NC_014727:1485656:149873614987361499374639Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,nickase, traa like protein4e-0652.8
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa4e-0652.8
NC_007802:3252300:3275866327586632772091344Jannaschia sp. CCS1, complete genomeMobA/MobL protein5e-0652.8