Pre_GI: BLASTP Hits

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Query: NC_013315:4015119:4039682 Clostridium difficile CD196 chromosome, complete genome

Start: 4039682, End: 4040365, Length: 684

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:4023139:404770240477024048385684Clostridium difficile BI1, complete genomeABC transporter permease7e-118422
NC_013316:4095905:412046841204684121151684Clostridium difficile R20291, complete genomeputative abc transporter, permease protein; putative abc transporter, permease protein7e-118422
NC_015500:2112975:213813621381362138849714Treponema brennaborense DSM 12168 chromosome, complete genomeABC transporter permease5e-32137
NC_011529:766292:769859769859770563705Thermococcus onnurineus NA1, complete genomehypothetical membrane protein, conserved5e-0961.6