Pre_GI: BLASTP Hits

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Query: NC_013315:2059007:2077857 Clostridium difficile CD196 chromosome, complete genome

Start: 2077857, End: 2078414, Length: 558

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:2067015:208590120859012086422522Clostridium difficile BI1, complete genometranscriptional regulator5e-96349
NC_016048:1438721:146841514684151468900486Oscillibacter valericigenes Sjm18-20, complete genomeputative MarR family transcriptional regulator7e-1063.5
NC_020389:1936000:195655219565521957028477Methanosarcina mazei Tuc01, complete genomeTranscriptional regulator, MarR family1e-0859.7
NC_014365:3123853:313873731387373139186450Desulfarculus baarsii DSM 2075 chromosome, complete genometranscriptional regulator, MarR family1e-0859.3
NC_015589:38418:500825008250429348Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein MarR5e-0857.4
NC_015172:1255956:127007012700701270522453Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeregulatory protein MarR4e-0650.8
NC_016047:1234743:123762612376261238153528Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein8e-0650.1