Pre_GI: BLASTP Hits

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Query: NC_013199:392450:402662 Lactobacillus rhamnosus Lc 705, complete genome

Start: 402662, End: 404530, Length: 1869

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014377:532816:5554125554125573791968Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional antiterminator, BglG9e-26119
NC_020272:1384525:1384525138452513864771953Bacillus amyloliquefaciens IT-45, complete genomeputative licABCH operon regulator4e-1893.6
NC_006177:1060428:1065806106580610677341929Symbiobacterium thermophilum IAM 14863, complete genometranscription antiterminator BglG family4e-1893.6
NC_009725:2517428:2538466253846625404181953Bacillus amyloliquefaciens FZB42, complete genomeManR7e-1892.8
NC_017191:2514401:2531358253135825333101953Bacillus amyloliquefaciens XH7 chromosome, complete genomemannose operon transcriptional antiterminator1e-1792.4
NC_017188:2512357:2529314252931425312661953Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional antiterminator1e-1792.4
NC_019842:2575000:2592489259248925944411953Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,licABCH operon regulator1e-1792
NC_016641:2291363:2303197230319723051041908Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional antiterminator BglG6e-1686.7
NC_017195:1230485:1247625124762512495711947Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeHTH domain family2e-1481.3
NC_016779:4969626:4983899498389949858451947Bacillus cereus F837/76 chromosome, complete genomeBglG family transcriptional antiterminator2e-1480.9
NC_013768:418000:4384014384014403351935Listeria monocytogenes 08-5923, complete genomehypothetical protein4e-1480.5
NC_013766:417991:4383804383804403141935Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein4e-1480.5
NC_003210:403743:4241304241304260641935Listeria monocytogenes EGD-e, complete genomehypothetical protein5e-1480.1
NC_014976:3469395:3483227348322734851731947Bacillus subtilis BSn5 chromosome, complete genometranscriptional antiterminator4e-1480.1
NC_020244:1264500:1273750127375012756961947Bacillus subtilis XF-1, complete genometranscriptional regulator7e-1479.7
NC_008600:5005345:5019631501963150215861956Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator1e-1378.6
NC_014650:1410790:1421157142115714230731917Geobacillus sp. Y4.1MC1 chromosome, complete genometranscriptional antiterminator BglG7e-1376.3
NC_012472:5015621:5029907502990750318531947Bacillus cereus 03BB102, complete genometranscriptional regulator1e-1275.5
NC_016641:373623:3840913840913860821992Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional antiterminator2e-1171.2
NC_014376:6296:90379037109561920Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional antiterminator, BglG4e-1170.5
NC_011969:4945441:4961027496102749629731947Bacillus cereus Q1 chromosome, complete genomemanr7e-1169.3
NC_014831:1843835:1874104187410418760741971Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional antiterminator, BglG8e-1065.9
NC_011660:2175537:2196185219618521981221938Listeria monocytogenes HCC23 chromosome, complete genomePRD/PTS system IIA 2 domain protein4e-0757
NC_017341:2303005:2304578230457823067102133Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,transcriptional antiterminator, BglG family/DNA-binding protein1e-0655.5
NC_002951:2208813:2210386221038622125182133Staphylococcus aureus subsp. aureus COL, complete genometranscriptional antiterminator, BglG family/DNA-binding protein1e-0655.5
NC_019970:2263427:226979822697982270622825Thermoanaerobacterium thermosaccharolyticum M0795, complete genometranscriptional antiterminator2e-0654.3