Pre_GI: BLASTP Hits

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Query: NC_013199:392450:393397 Lactobacillus rhamnosus Lc 705, complete genome

Start: 393397, End: 394803, Length: 1407

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020207:1346579:1364456136445613658621407Enterococcus faecium NRRL B-2354, complete genomehypothetical protein1e-180632
NC_013943:2547966:2562651256265125640241374Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeDcu family anaerobic c4-dicarboxylate antiporter3e-55216
NC_005139:2201820:2267477226747722688471371Vibrio vulnificus YJ016 chromosome I, complete sequenceC4-dicarboxylate transporter2e-52207
NC_010498:1117938:1128517112851711298781362Escherichia coli SMS-3-5, complete genomeanaerobic C4-dicarboxylate transporter1e-51204
NC_012779:1449500:1449734144973414512031470Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-50199
NC_015424:1689500:1692978169297816943511374Aeromonas veronii B565 chromosome, complete genomeanaerobic C4-dicarboxylate transporter DcuC2e-49197
NC_013943:2547966:2564260256426025656181359Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeDcu family anaerobic c4-dicarboxylate antiporter1e-44181
NC_014618:2139639:2144550214455021459171368Enterobacter cloacae SCF1 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter2e-44180
NC_012917:1506083:1508182150818215095341353Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family2e-43177
NC_004547:1600900:1603000160300016043521353Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeanaerobic C4-dicarboxylate transporter2e-43177
NC_013421:3279499:3310325331032533116771353Pectobacterium wasabiae WPP163, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family1e-42174
NC_015567:1660462:1666712166671216680701359Serratia sp. AS9 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family2e-42173
NC_015566:1659288:1666700166670016680581359Serratia sp. AS12 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family2e-42173
NC_009832:1719149:1721807172180717231651359Serratia proteamaculans 568, complete genomeanaerobic c4-dicarboxylate antiporter, DcuC family9e-42171
NC_013508:1289159:1294967129496712963251359Edwardsiella tarda EIB202, complete genomeC4-dicarboxylate transporter3e-41169
NC_012779:1286500:1291139129113912924971359Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-41168
NC_020211:1704500:1707137170713717084891353Serratia marcescens WW4, complete genomeanaerobic C4-dicarboxylate transport2e-40167
NC_015224:1763848:1766026176602617673841359Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,C4-dicarboxylate transporter DcuC3e-40166
NC_020064:1547524:1549556154955615509141359Serratia marcescens FGI94, complete genomec4-dicarboxylate anaerobic carrier family protein3e-37156
NC_012779:2064582:207731620773162078143828Edwardsiella ictaluri 93-146, complete genomehypothetical protein5e-1995.9
NC_014618:3482053:3496101349610134973811281Enterobacter cloacae SCF1 chromosome, complete genomeanaerobic c4-dicarboxylate antiporter1e-1377.8
NC_012779:2064582:207702020770202077361342Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1273.9
NC_019892:3366463:3370140337014033714561317Singulisphaera acidiphila DSM 18658 chromosome, complete genomeC4-dicarboxylate transporter3e-0757