Pre_GI: BLASTP Hits

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Query: NC_013199:1150000:1169667 Lactobacillus rhamnosus Lc 705, complete genome

Start: 1169667, End: 1170323, Length: 657

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014614:6115:304193041931048630Clostridium sticklandii, complete genomeputative Regulatory protein, TetR1e-1790.1
NC_015589:2049328:206850520685052069101597Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein TetR9e-1787
NC_007907:5428247:545899154589915459644654Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1583.2
NC_010162:11908749:119136901191369011914358669Sorangium cellulosum 'So ce 56', complete genomeTetR family transcriptional regulator2e-1582.4
NC_008527:611836:628031628031628600570Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator4e-1374.7
NC_015388:1612000:162577716257771626442666Desulfobacca acetoxidans DSM 11109 chromosome, complete genometranscriptional regulator, TetR family3e-1168.9
NC_013895:1203000:120676312067631207332570Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completetranscriptional regulator, TetR family4e-0961.6
NC_013406:3583474:361009336100933610752660Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator3e-0858.5
NC_021171:608315:629304629304629975672Bacillus sp. 1NLA3E, complete genomeTetR family transcriptional regulator4e-0858.2
NC_015589:2941953:295432629543262955000675Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein TetR7e-0857.4
NC_014926:608894:628881628881629447567Thermovibrio ammonificans HB-1 chromosome, complete genometranscriptional regulator, TetR family3e-0755.1
NC_011898:2509267:253223225322322532846615Clostridium cellulolyticum H10, complete genometranscriptional regulator, TetR family3e-0755.1
NC_007907:1547539:156633115663311566966636Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-0753.9
NC_016803:3795916:381691138169113817612702Desulfovibrio desulfuricans ND132 chromosome, complete genomeTetR family transcriptional regulator1e-0653.5
NC_021184:2936244:295949929594992960146648Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator1e-0653.1
NC_020244:3358399:336320833632083363792585Bacillus subtilis XF-1, complete genomeputative transcriptional regulator (TetR/AcrR family)3e-0652
NC_003296:1461538:146352614635261464227702Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN3e-0652