Pre_GI: BLASTP Hits

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Query: NC_013198:394000:457654 Lactobacillus rhamnosus GG, complete genome

Start: 457654, End: 457905, Length: 252

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008525:561000:578915578915579166252Pediococcus pentosaceus ATCC 25745, complete genomeTransposase2e-40164
NC_008526:565902:581096581096581491396Lactobacillus casei ATCC 334, complete genomeTransposase8e-37152
NC_010999:623489:634179634179634310132Lactobacillus casei, complete genomeTransposase2e-1994.4
NC_010999:623489:630566630566630697132Lactobacillus casei, complete genomeTransposase2e-1994.4
NC_010999:623489:642380642380642499120Lactobacillus casei, complete genomeTransposase4e-1683.6
NC_011881:1:172751727517556282Arthrobacter chlorophenolicus A6 plasmid pACHL02, completetransposase IS3/IS911 family protein1e-1168.2
NC_004116:1234712:125340912534091253684276Streptococcus agalactiae 2603V/R, complete genometransposase OrfA, IS3 family6e-1166.2
NC_016826:1783828:180385818038581804118261Streptococcus infantarius subsp. infantarius CJ18 chromosome,transposase7e-1165.9
NC_013656:2317224:233615723361572336417261Lactococcus lactis subsp. lactis KF147, complete genomeIS981 transposase A7e-1165.9
NC_013656:2317224:233865323386532338913261Lactococcus lactis subsp. lactis KF147, complete genomeIS981 transposase A9e-1165.5
NC_008527:611836:625680625680625940261Lactococcus lactis subsp. cremoris SK11, complete genomeTransposase9e-1165.5
NC_020450:875757:8897088897088908201113Lactococcus lactis subsp. lactis IO-1 DNA, complete genometransposase3e-1063.5
NC_012891:1277966:128957612895761289890315Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,transposase6e-1062.8
NC_008527:611836:621066621066621326261Lactococcus lactis subsp. cremoris SK11, complete genomeTransposase9e-1062.4
NC_007432:654904:708384708384708659276Streptococcus agalactiae A909, complete genomeISSag5, transposase orfA2e-0960.8
NC_015930:1397524:141329714132971413572276Lactococcus garvieae ATCC 49156, complete genometransposase2e-0960.8
NC_013169:2423863:244096624409662441265300Kytococcus sedentarius DSM 20547, complete genomeTransposase3e-0960.8
NC_015958:1983815:199762019976201997895276Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genometransposase IS3/IS911 family protein6e-0959.3
NC_014654:646500:655744655744656016273Halanaerobium sp. 'sapolanicus' chromosome, complete genometransposase IS3/IS911 family protein9e-0958.9
NC_013169:1941410:194616819461681946467300Kytococcus sedentarius DSM 20547, complete genomeTransposase1e-0858.5
NC_013169:2423863:243388824338882434187300Kytococcus sedentarius DSM 20547, complete genomeTransposase2e-0857.8
NC_013169:1845735:185280518528051853104300Kytococcus sedentarius DSM 20547, complete genomeTransposase4e-0856.6
NC_019897:3251639:327198232719823272269288Thermobacillus composti KWC4 chromosome, complete genometransposase6e-0856.2
NC_019897:700332:743419743419743706288Thermobacillus composti KWC4 chromosome, complete genometransposase6e-0856.2
NC_019897:3810000:382149538214953821782288Thermobacillus composti KWC4 chromosome, complete genometransposase7e-0856.2
NC_019897:1224798:125549712554971255784288Thermobacillus composti KWC4 chromosome, complete genometransposase2e-0754.7
NC_011567:2405000:240532524053252405621297Anoxybacillus flavithermus WK1, complete genomeTransposase3e-0753.9
NC_011567:2405000:242180224218022422098297Anoxybacillus flavithermus WK1, complete genomeTransposase3e-0753.9
NC_015660:487506:526515526515526802288Geobacillus thermoglucosidasius C56-YS93 chromosome, completetransposase IS3/IS911 family protein3e-0753.5
NC_015671:3093596:309880030988003099102303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_008526:506263:522131522131522406276Lactobacillus casei ATCC 334, complete genomeTransposase4e-0753.5
NC_008526:565902:585251585251585526276Lactobacillus casei ATCC 334, complete genomeTransposase4e-0753.5
NC_015671:1678088:168770916877091687996288Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein4e-0753.5
NC_007508:689046:701430701430701723294Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometransposase5e-0753.1
NC_010999:561914:577864577864578175312Lactobacillus casei, complete genomePutative uncharacterized protein ORFA (Transposase subunit A)5e-0753.1
NC_014376:1217000:1247149124714912482961148Clostridium saccharolyticum WM1 chromosome, complete genometransposase IS3/IS911 family protein7e-0752.8
NC_014151:4021394:403326040332604033562303Cellulomonas flavigena DSM 20109 chromosome, complete genometransposase IS3/IS911 family protein9e-0752.4
NC_015671:255808:290924290924291226303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein1e-0652
NC_015671:139892:144607144607144909303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein1e-0652
NC_015671:557720:572214572214572516303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein1e-0652
NC_015671:255808:266968266968267270303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein1e-0652
NC_008346:2523289:255924425592442559522279Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetransposase1e-0652
NC_015957:6859259:687403768740376874324288Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS3/IS911 family protein2e-0651.2
NC_005966:923008:944492944492944785294Acinetobacter sp. ADP1, complete genomeIS1236 transposase protein 12e-0651.2
NC_009664:4423829:460578846057884606114327Kineococcus radiotolerans SRS30216, complete genometransposase IS3/IS911 family protein2e-0651.2
NC_009664:4696961:471342647134264713752327Kineococcus radiotolerans SRS30216, complete genometransposase IS3/IS911 family protein2e-0651.2
NC_005966:923008:942177942177942470294Acinetobacter sp. ADP1, complete genomeIS1236 transposase protein 12e-0651.2
NC_004369:531579:546165546165546473309Corynebacterium efficiens YS-314, complete genomeputative transposase2e-0651.2
NC_004369:1268956:129390312939031294211309Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-0651.2
NC_004369:1268956:128923912892391289547309Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-0651.2
NC_015434:2460053:248946924894692489777309Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS3/IS911 family protein3e-0650.8
NC_015434:666692:685636685636685944309Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS3/IS911 family protein3e-0650.8
NC_014169:2353711:236787823678782368171294Bifidobacterium longum subsp. longum JDM301 chromosome, completetransposase IS3/IS911 family protein3e-0650.8
NC_014550:1581812:167095416709541671244291Arthrobacter arilaitensis Re117, complete genometransposase of ISAar46, IS3 family, IS3 group, orfA3e-0650.8
NC_012590:37697:435114351143810300Corynebacterium aurimucosum ATCC 700975, complete genomeputative transposase3e-0650.8
NC_021182:4829000:484843248484324848725294Clostridium pasteurianum BC1, complete genometransposase3e-0650.8
NC_013132:5250385:526934152693415269658318Chitinophaga pinensis DSM 2588, complete genometransposase IS3/IS911 family protein2e-0650.8
NC_020911:2998000:304094130409413041216276Octadecabacter antarcticus 307, complete genomeIS3-family transposase4e-0650.4
NC_020911:3159290:316812931681293168404276Octadecabacter antarcticus 307, complete genomeIS3-family transposase4e-0650.4
NC_018866:1966373:198720919872091987493285Dehalobacter sp. DCA chromosome, complete genometransposase (05)4e-0650.4
NC_018867:1837941:185869718586971858981285Dehalobacter sp. CF chromosome, complete genomeTransposase-like protein4e-0650.4
NC_018867:1996154:201699020169902017274285Dehalobacter sp. CF chromosome, complete genometransposase (05)4e-0650.4
NC_018866:611588:631286631286631570285Dehalobacter sp. DCA chromosome, complete genomehypothetical protein4e-0650.4
NC_018867:677848:695730695730696014285Dehalobacter sp. CF chromosome, complete genomeTransposase-like protein4e-0650.4
NC_006087:345976:375552375552375857306Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase3e-0650.4
NC_010612:4679594:468062346806234680955333Mycobacterium marinum M, complete genometransposase3e-0650.4
NC_018867:1303287:131454013145401314824285Dehalobacter sp. CF chromosome, complete genometransposase (05)3e-0650.4
NC_018866:1224748:123600112360011236285285Dehalobacter sp. DCA chromosome, complete genometransposase3e-0650.4
NC_012803:1094679:110456011045601104853294Micrococcus luteus NCTC 2665, complete genomeTransposase3e-0650.4
NC_012590:284793:294533294533294832300Corynebacterium aurimucosum ATCC 700975, complete genomeputative transposase4e-0650.1
NC_018524:557666:574471574471575214744Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometransposase family protein6e-0649.7
NC_012803:691215:714376714376714663288Micrococcus luteus NCTC 2665, complete genomeTransposase6e-0649.7
NC_014616:462000:479520479520479807288Bifidobacterium bifidum S17 chromosome, complete genometransposase IS3/IS911 family protein9e-0648.9