Pre_GI: BLASTP Hits

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Query: NC_013198:298000:312951 Lactobacillus rhamnosus GG, complete genome

Start: 312951, End: 313151, Length: 201

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:282901:294863294863295183321Lactobacillus rhamnosus Lc 705, complete genomethiol-disulfide isomerase and thioredoxins6e-32135
NC_008526:250000:264629264629264943315Lactobacillus casei ATCC 334, complete genomeThiol-disulfide isomerase and thioredoxin6e-22102
NC_010999:252605:263900263900264214315Lactobacillus casei, complete genomeThioredoxin (Trx)6e-22102
NC_014334:267409:281451281451281783333Lactobacillus casei str. Zhang chromosome, complete genomethiol-disulfide isomerase and thioredoxin7e-22102
NC_015499:1403447:141993914199391420250312Thermodesulfobium narugense DSM 14796 chromosome, complete genomethioredoxin3e-0753.9
NC_013173:1231213:124439012443901244710321Desulfomicrobium baculatum DSM 4028, complete genomethioredoxin6e-0649.3