Pre_GI: BLASTP Hits

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Query: NC_013198:1095591:1129241 Lactobacillus rhamnosus GG, complete genome

Start: 1129241, End: 1129615, Length: 375

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013893:2310495:232888923288892329218330Staphylococcus lugdunensis HKU09-01 chromosome, complete genomehypothetical phage-related protein2e-1064.3
NC_005362:1289835:130801113080111308385375Lactobacillus johnsonii NCC 533, complete genomeLj928 prophage protein3e-0960.8
NC_007622:1842000:186435018643501864682333Staphylococcus aureus RF122, complete genomehypothetical phage-related protein1e-0652.4
NC_007795:1922000:194362419436241943956333Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephi Mu50B-like protein9e-0752.4
NC_009782:920272:941504941504941836333Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein9e-0752.4
NC_002758:918827:940060940060940392333Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein9e-0752.4
NC_009487:921884:943387943387943719333Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein9e-0752.4
NC_009632:921759:943262943262943594333Staphylococcus aureus subsp. aureus JH1 chromosome, completephi Mu50B-like protein9e-0752.4
NC_009641:1105075:112203911220391122371333Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein9e-0752.4
NC_009641:1979053:199975719997572000089333Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein9e-0752.4
NC_010609:880196:901320901320901685366Lactobacillus reuteri JCM 1112, complete genomehypothetical protein2e-0651.6