Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:833721:840661 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 840661, End: 842586, Length: 1926

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006138:2630338:2639223263922326411241902Desulfotalea psychrophila LSv54, complete genomehypothetical protein5e-142505
NC_011901:3072817:3081331308133130832261896Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein6e-60232
NC_007643:955362:9646879646879666271941Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein9e-59228
NC_014655:1098428:1098428109842811003291902Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein6e-58225
NC_017986:3407913:3418008341800834199181911Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-57223
NC_006350:595893:6214136214136233321920Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein5e-56219
NC_012881:334250:3424093424093442981890Desulfovibrio salexigens DSM 2638, complete genomehypothetical protein7e-38159
NC_007929:1463295:1464041146404114651861146Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein5e-0653.5