Pre_GI: BLASTP Hits

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Query: NC_012917:569856:582689 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 582689, End: 583030, Length: 342

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:985617:997746997746998087342Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein4e-60229
NC_012880:3529017:353374835337483534089342Dickeya dadantii Ech703, complete genomehypothetical protein4e-59226
NC_012912:4012112:401837640183764018717342Dickeya zeae Ech1591, complete genomehypothetical protein3e-54209
NC_012880:3982383:398876139887613989111351Dickeya dadantii Ech703, complete genomehypothetical protein2e-50197
NC_009708:4182460:419971341997134200045333Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-1685.1