Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:4646491:4647594 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 4647594, End: 4648415, Length: 822

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:138500:153765153765154586822Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-156551
NC_014915:1909275:194018819401881941036849Geobacillus sp. Y412MC52 chromosome, complete genomepeptidase M55 D-aminopeptidase1e-48193
NC_020210:1951746:197640819764081977256849Geobacillus sp. GHH01, complete genomeD-alanyl-aminopeptidase1e-48193
NC_013411:2767400:280025228002522801100849Geobacillus sp. Y412MC61, complete genomepeptidase M55 D-aminopeptidase1e-48193
NC_016582:1:126651266513492828Streptomyces bingchenggensis BCW-1 chromosome, complete genomeD-aminopeptidase1e-38160
NC_009633:4308016:432373343237334324554822Alkaliphilus metalliredigens QYMF chromosome, complete genomepeptidase M55, D-aminopeptidase3e-38159
NC_014210:3817948:383946438394643840297834Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,peptidase M55 D-aminopeptidase1e-36153
NC_007644:1293701:130902113090211309836816Moorella thermoacetica ATCC 39073, complete genomePeptidase M55, D-aminopeptidase2e-36152
NC_009633:2137999:215195721519572152778822Alkaliphilus metalliredigens QYMF chromosome, complete genomepeptidase M55, D-aminopeptidase1e-35150
NC_013159:2098500:212527521252752126102828Saccharomonospora viridis DSM 43017, complete genomeD-aminopeptidase DppA3e-35149
NC_014377:1897857:191877419187741919592819Thermosediminibacter oceani DSM 16646 chromosome, complete genomeD-aminopeptidase DppA2e-35149
NC_013524:969038:987357987357988214858Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomepeptidase M55 D-aminopeptidase5e-31135
NC_004193:3078730:308066330806633081487825Oceanobacillus iheyensis HTE831, complete genomedipeptide ABC transporter ATP-binding protein5e-30131
NC_010999:2059738:207012920701292070983855Lactobacillus casei, complete genomeD-aminopeptidase6e-28124
NC_010003:528855:544143544143544961819Petrotoga mobilis SJ95, complete genomepeptidase M55 D-aminopeptidase5e-25115
NC_014961:1235500:124947912494791250327849Desulfurococcus mucosus DSM 2162 chromosome, complete genomeD-aminopeptidase DppA3e-25115
NC_012108:2220983:225101322510132251801789Desulfobacterium autotrophicum HRM2, complete genomeDppA15e-21101
NC_014153:2125551:212659821265982127395798Thiomonas intermedia K12 chromosome, complete genomepeptidase M55 D-aminopeptidase3e-2099
NC_017095:2143845:216544721654472166286840Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeD-aminopeptidase2e-1996.3
NC_009454:1042592:104546710454671046297831Pelotomaculum thermopropionicum SI, complete genomeD-aminopeptidase3e-1995.9