Pre_GI: BLASTP Hits

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Query: NC_012917:4646491:4646491 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 4646491, End: 4647567, Length: 1077

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:138500:1545891545891556711083Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative peptidase5e-180630
NC_014829:3305762:3311186331118633122441059Bacillus cellulosilyticus DSM 2522 chromosome, complete genomepeptidase S58 DmpA7e-69261
NC_014355:288000:2882392882392895041266Candidatus Nitrospira defluvii, complete genomepeptidase S589e-52204
NC_013730:6933754:6941392694139269425191128Spirosoma linguale DSM 74, complete genomepeptidase S58 DmpA2e-46186
NC_010162:7620000:7640871764087176419561086Sorangium cellulosum 'So ce 56', complete genomeaminopeptidase8e-43174
NC_014815:6779538:6781169678116967822121044Micromonospora sp. L5 chromosome, complete genomepeptidase s58 dmpa4e-38158
NC_002947:4362271:4366912436691243680451134Pseudomonas putida KT2440, complete genomeD-aminopeptidase putative3e-37156