Pre_GI: BLASTP Hits

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Query: NC_012917:3241196:3275075 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3275075, End: 3275536, Length: 462

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012580:301500:333851333851334288438Vibrio cholerae M66-2 chromosome II, complete sequenceNUDIX hydrolase4e-24110
NC_013016:571255:573720573720574178459Neisseria meningitidis alpha14 chromosome, complete genomedATP pyrophosphohydrolase7e-0959.7
NC_003112:673772:674747674747675205459Neisseria meningitidis MC58, complete genomedATP pyrophosphohydrolase9e-0959.3
NC_008767:613394:617253617253617711459Neisseria meningitidis FAM18, complete genomeputative nucleoside triphosphate pyrophosphohydrolase9e-0959.3
NC_010120:609323:613182613182613640459Neisseria meningitidis 053442, complete genomenucleoside triphosphate pyrophosphohydrolase9e-0959.3
NC_017501:1680075:170101817010181701476459Neisseria meningitidis 8013, complete genomedATP pyrophosphohydrolase8e-0959.3
NC_017514:1568591:158815015881501588602453Neisseria meningitidis M01-240149 chromosome, complete genomedATP pyrophosphohydrolase8e-0959.3
NC_017518:743955:746420746420746872453Neisseria meningitidis NZ-05/33 chromosome, complete genomedATP pyrophosphohydrolase8e-0959.3
NC_017515:1601954:161788616178861618338453Neisseria meningitidis M04-240196 chromosome, complete genomedATP pyrophosphohydrolase8e-0959.3
NC_017516:1613762:162987716298771630329453Neisseria meningitidis H44/76 chromosome, complete genomedATP pyrophosphohydrolase8e-0959.3
NC_017517:703811:705379705379705831453Neisseria meningitidis M01-240355 chromosome, complete genomedATP pyrophosphohydrolase1e-0858.5
NC_017505:670919:674779674779675237459Neisseria meningitidis alpha710 chromosome, complete genomeputative nucleoside triphosphate pyrophosphohydrolase1e-0858.5
NC_017513:618500:620977620977621429453Neisseria meningitidis G2136 chromosome, complete genomedATP pyrophosphohydrolase2e-0858.5
NC_004547:2810151:281151128115112811954444Erwinia carotovora subsp. atroseptica SCRI1043, complete genomedATP pyrophosphohydrolase3e-0650.8