Pre_GI: BLASTP Hits

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Query: NC_012917:2921932:2942732 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2942732, End: 2943112, Length: 381

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1970686:197323519732351973615381Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar protein5e-62236
NC_013592:1730505:173490817349081735270363Dickeya dadantii Ech586, complete genomeflagellar export chaperone5e-25112
NC_014500:3023762:305067930506793051041363Dickeya dadantii 3937 chromosome, complete genomeflagellar biosynthesis protein fliT3e-24110
NC_012912:1788308:179393717939371794299363Dickeya zeae Ech1591, complete genomeflagellar export chaperone2e-23107
NC_015224:2017781:203132620313262031688363Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar biosynthesis protein FliT1e-2098.2
NC_014562:1844268:184610518461051846470366Pantoea vagans C9-1 chromosome, complete genomeFlagellar protein fliT3e-2097.1
NC_011740:1189455:120861912086191208990372Escherichia fergusonii ATCC 35469, complete genomeputative chaperone for FliD4e-1993.2
NC_016514:2950860:297340529734052973767363Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar protein fliT2e-1890.9
NC_009778:1222273:124663212466321246994363Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1788.2
NC_020260:1293860:132324413232441323606363Cronobacter sakazakii Sp291, complete genomeflagellar biosynthesis protein FliT1e-1788.2
NC_014837:2586870:259406925940692594428360Pantoea sp. At-9b chromosome, complete genomeflagellar export chaperone2e-1787.4
NC_016816:1912366:192887919288791929238360Pantoea ananatis LMG 5342, complete genomeflagellar biosynthesis protein FliT6e-1785.9
NC_008800:2695977:272207927220792722441363Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar biosynthesis protein FliT3e-1683.6
NC_015968:2845751:285198928519892852351363Enterobacter asburiae LF7a chromosome, complete genomeflagellar export chaperone8e-1682.4
NC_014121:1357339:137284413728441373218375Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeflagellar protein FliT2e-1581.3
NC_012880:1765920:182087018208701821244375Dickeya dadantii Ech703, complete genomeflagellar export chaperone2e-1477.8