Pre_GI: BLASTP Hits

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Query: NC_012917:2641000:2655188 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2655188, End: 2655835, Length: 648

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:1939747:195351319535131954157645Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-81300
NC_009655:1357486:137278013727801373415636Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein3e-56218
NC_015424:2316228:232593823259382326525588Aeromonas veronii B565 chromosome, complete genomebacteriophage protein3e-23108
NC_015761:1017301:101886610188661019468603Salmonella bongori NCTC 12419, complete genomebacteriophage protein5e-21100
NC_009708:2537557:254764525476452548238594Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-2098.6
NC_017046:2756000:276159827615982762200603Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein7e-2097.4
NC_016856:2812905:281606728160672816669603Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein7e-2097.4
NC_011080:2761403:276456527645652765167603Salmonella enterica subsp. enterica serovar Newport str. SL254,gifsy-2 prophage protein7e-2097.4
NC_009792:1770106:177774617777461778345600Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1996.3
NC_016514:2476359:249966024996602500262603Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein6e-1994
NC_003198:1908238:191622819162281916827600Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1892
NC_011415:1472500:149298914929891493588600Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1892
NC_002695:1929215:193898819389881939587600Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1892
NC_002655:2142587:214757821475782148177600Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R2e-1892
NC_011294:1465500:147637514763751476974600Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-1892
NC_011205:1345511:136710913671091367708600Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-1891.7
NC_011294:1220526:123119712311971231796600Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-1891.7
NC_016831:1734292:174595217459521746551600Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-1891.7
NC_013850:2182337:220551122055112206107597Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF13676e-1890.9
NC_009648:1541699:156088115608811561477597Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-1789.4
NC_016902:2580774:258882025888202589419600Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-1789
CP002516:2580774:258882025888202589419600Escherichia coli KO11, complete genomeprotein of unknown function DUF13672e-1789
NC_020211:2094500:210682921068292107425597Serratia marcescens WW4, complete genomehypothetical protein2e-1789
NC_011283:2836000:290201929020192902615597Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein3e-1788.6
NC_008563:1475500:148148314814831482082600Escherichia coli APEC O1, complete genomehypothetical bacteriophage protein4e-1788.2
NC_012214:1974500:198613619861361986735600Erwinia pyrifoliae Ep1/96, complete genomeputative bacteriophage protein2e-1479.3
NC_011415:2277559:228598022859802286576597Escherichia coli SE11 chromosome, complete genomehypothetical protein9e-1477
NC_009801:2193000:219955521995552200151597Escherichia coli E24377A, complete genomehypothetical protein9e-1477
NC_004129:4368356:437433743743374374924588Pseudomonas fluorescens Pf-5, complete genomephage D3 protein3e-1375.1
NC_011770:2690501:270942127094212710008588Pseudomonas aeruginosa LESB58, complete genomehypothetical protein7e-1373.9