Pre_GI: BLASTP Hits

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Query: NC_012917:2362725:2380030 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2380030, End: 2380347, Length: 318

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:3192817:320525132052513205568318Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-1166.6
NC_015224:2473582:248295224829522483269318Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Helix-destabilizing protein7e-1166.2
NC_015224:2473582:249124424912442491561318Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Helix-destabilizing protein7e-1166.2