Pre_GI: BLASTP Hits

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Query: NC_012917:1506083:1539758 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1539758, End: 1540540, Length: 783

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:3279499:327949932794993280281783Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF10174e-133474
NC_008570:3220539:322930532293053230063759Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative periplasmic protein7e-22104
NC_017047:3936624:396388039638803964623744Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-1584
NC_015061:3840463:390220539022053902948744Rahnella sp. Y9602 chromosome, complete genomehypothetical protein1e-1583.2
NC_016818:3887000:391285339128533913596744Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein3e-1375.9
NC_015497:1287877:133042013304201331217798Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein8e-1374.3
NC_008322:1595500:162651316265131627298786Shewanella sp. MR-7, complete genomeprotein of unknown function DUF10177e-1374.3
NC_008321:1523323:155510315551031555888786Shewanella sp. MR-4, complete genomeprotein of unknown function DUF10173e-1272.4
NC_008750:1659095:167791316779131678698786Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF10173e-1065.9
NC_008228:3841897:384480538448053845548744Pseudoalteromonas atlantica T6c, complete genomeprotein of unknown function DUF10171e-0653.5
NC_015633:461143:461143461143462012870Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-0653.1
NC_011663:1709003:174630617463061747091786Shewanella baltica OS223 chromosome, complete genomehypothetical protein4e-0652