Pre_GI: BLASTP Hits

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Query: NC_012917:1506083:1531467 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1531467, End: 1531925, Length: 459

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012691:2225000:223921622392162239683468Tolumonas auensis DSM 9187, complete genomeNUDIX hydrolase5e-48189
NC_008253:2134110:216358321635832164062480Escherichia coli 536, complete genomeGDP-mannose mannosyl hydrolase9e-44175
NC_006905:2175361:220363322036332204106474Salmonella enterica subsp. enterica serovar Choleraesuis strputative glycosyl transferase in colanic acid biosynthesis1e-43175
NC_011745:2302979:233469523346952335174480Escherichia coli ED1a chromosome, complete genomeGDP-mannose mannosyl hydrolase1e-43174
CP002185:2233732:226364022636402264122483Escherichia coli W, complete genomeGDP-mannose mannosyl hydrolase2e-43174
NC_011415:2346474:236230623623062362806501Escherichia coli SE11 chromosome, complete genomeGDP-mannose mannosyl hydrolase2e-43174
NC_011741:2155947:218688621868862187365480Escherichia coli IAI1 chromosome, complete genomeGDP-mannose mannosyl hydrolase2e-43174
CU928160:2155947:218688621868862187365480Escherichia coli IAI1 chromosome, complete genomeGDP-mannose mannosyl hydrolase2e-43174
NC_004431:2383901:241327924132792413761483Escherichia coli CFT073, complete genomeGDP-mannose mannosyl hydrolase4e-43173
NC_011751:2395882:242455124245512425030480Escherichia coli UMN026 chromosome, complete genomeGDP-mannose mannosyl hydrolase3e-43173
NC_010067:807129:809227809227809700474Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-43172
NC_011740:2135141:214430821443082144811504Escherichia fergusonii ATCC 35469, complete genomeGDP-mannose mannosyl hydrolase7e-43172
NC_011601:2211917:222749722274972227997501Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeGDP-mannose mannosyl hydrolase1e-42172
NC_015761:2062345:209137720913772091856480Salmonella bongori NCTC 12419, complete genomeO-antigen biosynthesis protein1e-42171
NC_018868:569423:593096593096593551456Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeNUDIX hydrolase1e-42171
NC_014012:1676983:168142616814261681917492Shewanella violacea DSS12, complete genomeGDP-mannose mannosyl hydrolase4e-40163
NC_013282:2827757:286012428601242860603480Cronobacter turicensis, complete genomeGDP-mannose mannosyl hydrolase7e-40162
NC_013008:2733203:274208027420802742589510Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeGDP-mannose mannosylhydrolase6e-39159
NC_011353:2734222:274309927430992743608510Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeGDP-mannose mannosyl hydrolase6e-39159
NC_002655:2839600:284847828484782848987510Escherichia coli O157:H7 EDL933, complete genomeGDP-mannose mannosylhydrolase6e-39159
NC_002695:2769387:277826427782642778773510Escherichia coli O157:H7 str. Sakai, complete genomeputative GDP-L-fucose pathway enzyme6e-39159
NC_005139:343500:359606359606360088483Vibrio vulnificus YJ016 chromosome I, complete sequenceputative GDP-mannose mannosylhydrolase3e-38157
NC_013941:2544569:256492125649212565415495Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeGDP-mannose mannosyl hydrolase3e-37154
NC_012731:3500545:353046135304613530919459Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeGDP-mannose mannosyl hydrolase5e-37152
NC_008570:3220539:325274332527433253231489Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeGDP-mannose mannosyl hydrolase5e-37152
NC_013364:2672837:269030126903012690750450Escherichia coli O111:H- str. 11128, complete genomeputative GDP-mannose mannosylhydrolase5e-32136
NC_007498:2087811:209745020974502097800351Pelobacter carbinolicus DSM 2380, complete genomeGDP-mannose mannosyl hydrolase1e-24112
NC_008781:3365468:337208133720813372644564Polaromonas naphthalenivorans CJ2, complete genomeNUDIX hydrolase3e-22103
NC_015955:581685:600161600161600613453Halophilic archaeon DL31 plasmid phalar01, complete sequenceNUDIX hydrolase2e-1891.3
NC_013202:1144192:116040611604061160834429Halomicrobium mukohataei DSM 12286, complete genomeNUDIX hydrolase5e-1890.1
NC_014735:199434:202775202775203218444Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completeADP-ribose pyrophosphatase8e-1889.4
NC_006396:1380882:140549314054931406137645Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceGDP-mannose mannosyl hydrolase1e-1685.1
NC_005125:1161000:116396011639601164454495Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0755.1