Pre_GI: BLASTP Hits

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Query: NC_012848:320883:338904 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,

Start: 338904, End: 340472, Length: 1569

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019973:5601346:5623469562346956250281560Mesorhizobium australicum WSM2073, complete genomecytochrome c oxidase accessory protein FixG0665
NC_014923:5666619:5694509569450956960681560Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completecytochrome c oxidase accessory protein CcoG0665
NC_015675:6228000:6249180624918062507391560Mesorhizobium opportunistum WSM2075 chromosome, complete genomecytochrome c oxidase accessory protein CcoG0665
NC_011958:53426:6891268912704201509Rhodobacter sphaeroides KD131 chromosome 2, complete genomeProtein rdxA1e-122440
NC_016622:1599681:1612090161209016136071518Azospirillum lipoferum 4B, complete genomeNitrogen fixation protein FixG; 4Fe-4S ferredoxin, iron-sulfur binding1e-108393
NC_007643:3799425:3836235383623538377551521Rhodospirillum rubrum ATCC 11170, complete genome4Fe-4S ferredoxin, iron-sulfur binding2e-103376
NC_013422:2004478:2011816201181620132371422Halothiobacillus neapolitanus c2, complete genomecytochrome c oxidase accessory protein CcoG1e-81304
NC_007298:778723:7868947868947883121419Dechloromonas aromatica RCB, complete genome4Fe-4S ferredoxin, iron-sulfur binding1e-76287
NC_007298:750361:7503617503617517761416Dechloromonas aromatica RCB, complete genome4Fe-4S ferredoxin, iron-sulfur binding1e-75284
NC_009465:29735:8384283842852361395Candidatus Vesicomyosocius okutanii HA, complete genomeferredoxin2e-75283
NC_008782:1136732:1143166114316611446081443Acidovorax sp. JS42, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein5e-75282
NC_011992:1038985:1045422104542210468641443Acidovorax ebreus TPSY, complete genomecytochrome c oxidase accessory protein CcoG6e-75282
NC_015422:1163752:1173706117370611751481443Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome c oxidase accessory protein CcoG3e-74279
NC_014910:3458475:3469199346919934706411443Alicycliphilus denitrificans BC chromosome, complete genomecytochrome c oxidase accessory protein ccog3e-74279
NC_007005:4062311:4082060408206040834721413Pseudomonas syringae pv. syringae B728a, complete genome4Fe-4S ferredoxin, iron-sulfur binding5e-74278
NC_008702:1432952:1463836146383614652601425Azoarcus sp. BH72, complete genomeputative iron-sulfur 4Fe-4S ferredoxin transmembrane protein3e-73276
NC_007404:359764:3607583607583621941437Thiobacillus denitrificans ATCC 25259, complete genomeiron-sulfur cluster-binding protein3e-68259
NC_021150:1965264:1984177198417719855891413Azotobacter vinelandii CA6, complete genomecytochrome c oxidase accessory protein CcoG8e-68258
NC_012560:1965251:1984164198416419855761413Azotobacter vinelandii DJ, complete genomecytochrome c oxidase accessory protein CcoG8e-68258
NC_009379:435404:4492114492114506681458Polynucleobacter sp. QLW-P1DMWA-1, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein6e-65248
NC_020126:7896447:7916213791621379176311419Myxococcus stipitatus DSM 14675, complete genomecytochrome c oxidase accessory protein FixG2e-53210
NC_008095:6877388:6887246688724668886851440Myxococcus xanthus DK 1622, complete genomecytochrome c oxidase accessory protein FixG4e-50199
NC_011146:1429836:1429836142983614310591224Geobacter bemidjiensis Bem, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein1e-25117
NC_009715:167513:1813461813461827161371Campylobacter curvus 525.92 chromosome, complete genomecytochrome c oxidase accessory protein CcoG4e-24113