Pre_GI: BLASTP Hits

Some Help

Query: NC_012848:320883:330129 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,

Start: 330129, End: 330617, Length: 489

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009667:1371924:139029313902931390754462Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceGCN5-related N-acetyltransferase1e-1479
NC_014532:2268078:229325222932522293734483Halomonas elongata DSM 2581, complete genomeGCN5-related N-acetyltransferase1e-1478.6
NC_007963:3113739:313234031323403132825486Chromohalobacter salexigens DSM 3043, complete genomeGCN5-related N-acetyltransferase2e-1374.7
NC_007907:3230513:324081532408153241273459Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1168.9
NC_011830:4234392:424311842431184243576459Desulfitobacterium hafniense DCB-2, complete genomeGCN5-related N-acetyltransferase2e-1168.2
NC_012912:844339:851411851411851905495Dickeya zeae Ech1591, complete genomeGCN5-related N-acetyltransferase1e-1065.5
NC_005773:3253575:326363632636363264094459Pseudomonas syringae pv. phaseolicola 1448A, complete genomeacetyltransferase, GNAT family8e-1063.2
NC_016612:361417:360941360941361420480Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGNAT family acetyltransferase1e-0858.9
NC_013421:3093995:310293831029383103408471Pectobacterium wasabiae WPP163, complete genomeGCN5-related N-acetyltransferase1e-0755.8
NC_008767:2160000:218147821814782181969492Neisseria meningitidis FAM18, complete genomeputative acetyltransferase4e-0753.9
NC_002946:1902642:190445619044561904947492Neisseria gonorrhoeae FA 1090, complete genomeputative acetyltransferase1e-0652.8
NC_017511:1812000:183150318315031831979477Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative acetyltransferase1e-0652.8
NC_011035:1908000:192766019276601928136477Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative acetyltransferase1e-0652.8
NC_003047:2477810:248153624815362481880345Sinorhizobium meliloti 1021, complete genomehypothetical protein1e-0652.4
NC_013956:1762171:176859317685931769054462Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-0651.6