Pre_GI: BLASTP Hits

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Query: NC_012808:1220378:1266898 Methylobacterium extorquens AM1, complete genome

Start: 1266898, End: 1267347, Length: 450

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:670101:681799681799682257459Methylobacterium extorquens DM4, complete genomehypothetical protein1e-46184
NC_009720:3210387:321731532173153217773459Xanthobacter autotrophicus Py2, complete genomeprotein of unknown function DUF395 YeeE/YedE3e-40163
NC_010725:1419272:145626014562601456718459Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF395 YeeE/YedE3e-31133
NC_017986:331610:363263363263363682420Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-30130
NC_008313:2142397:215713621571362157567432Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical membrane protein1e-29128
NC_007508:2756945:277758627775862778017432Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein5e-29126
NC_017986:5797044:580438258043825804810429Pseudomonas putida ND6 chromosome, complete genomehypothetical protein7e-28122
NC_009512:2782000:279641927964192796847429Pseudomonas putida F1, complete genomeprotein of unknown function DUF395, YeeE/YedE7e-28122
NC_012660:4669500:467213346721334672558426Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein9e-28122
NC_008209:761487:761487761487761915429Roseobacter denitrificans OCh 114, complete genomehypothetical protein7e-27119
NC_009952:2661268:268170526817052682142438Dinoroseobacter shibae DFL 12, complete genomehypothetical protein5e-27119
NC_018643:807405:820641820641821063423Alpha proteobacterium HIMB5 chromosome, complete genomehypothetical protein3e-26117
NC_008260:2961291:298384229838422984267426Alcanivorax borkumensis SK2, complete genomehypothetical protein3e-25113
NC_012968:865465:869861869861870274414Methylotenera mobilis JLW8, complete genomeprotein of unknown function DUF395 YeeE/YedE6e-25112
NC_008782:2568027:259290825929082593330423Acidovorax sp. JS42, complete genomeprotein of unknown function DUF395, YeeE/YedE1e-24112
NC_014623:4662990:466551246655124665961450Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein1e-24111
NC_008095:5312926:531656453165645317034471Myxococcus xanthus DK 1622, complete genomeYeeE/YedE family protein9e-22102
NC_003911:1078949:107894910789491079380432Silicibacter pomeroyi DSS-3, complete genomeYeeE/YedE family protein3e-1890.5
NC_010172:1522707:153608515360851536366282Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF395, YeeE/YedE4e-1167
NC_007908:1946902:194751519475151947937423Rhodoferax ferrireducens T118, complete genomeprotein of unknown function DUF395, YeeE/YedE3e-0857.4
NC_013923:45876:832188321883679462Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceprotein of unknown function DUF395 YeeE/YedE2e-0755.1