Pre_GI: BLASTP Hits

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Query: NC_012808:1220378:1266469 Methylobacterium extorquens AM1, complete genome

Start: 1266469, End: 1266894, Length: 426

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:6259649:627115162711516271576426Methylobacterium nodulans ORS 2060, complete genomeprotein of unknown function DUF395 YeeE/YedE9e-33138
NC_009720:3210387:321777832177783218203426Xanthobacter autotrophicus Py2, complete genomeprotein of unknown function DUF395 YeeE/YedE7e-30129
NC_012988:670101:681368681368681793426Methylobacterium extorquens DM4, complete genomehypothetical protein3e-28123
NC_008313:2142397:215670021567002157134435Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical membrane protein5e-1786.3
NC_010725:1419272:145583214558321456263432Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF395 YeeE/YedE2e-1580.9
NC_018643:807405:821060821060821479420Alpha proteobacterium HIMB5 chromosome, complete genomehypothetical protein2e-1477.4
NC_017986:5797044:580390158039015804380480Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1477.4
NC_017986:331610:362826362826363266441Pseudomonas putida ND6 chromosome, complete genomemembrane protein4e-1477
NC_009512:2782000:279684927968492797604756Pseudomonas putida F1, complete genomeprotein of unknown function DUF395, YeeE/YedE3e-1477
NC_009952:2661268:268214726821472682581435Dinoroseobacter shibae DFL 12, complete genomehypothetical protein3e-1477
NC_012660:4669500:467169946716994672130432Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein2e-1374.3
NC_008260:2961291:298335429833542983845492Alcanivorax borkumensis SK2, complete genomehypothetical protein4e-1167
NC_008209:761487:761917761917762348432Roseobacter denitrificans OCh 114, complete genomeYeeE/YedE domain protein6e-1166.2
NC_008782:2568027:259244225924422592885444Acidovorax sp. JS42, complete genomeprotein of unknown function DUF395, YeeE/YedE4e-1063.5
NC_012968:865465:870275870275870700426Methylotenera mobilis JLW8, complete genomeprotein of unknown function DUF395 YeeE/YedE2e-0961.2
NC_014623:4662990:466595846659584666383426Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein2e-0857.4
NC_008095:5312926:531704653170465317471426Myxococcus xanthus DK 1622, complete genomeYeeE/YedE family protein7e-0855.8
NC_003911:1078949:107938010793801079808429Silicibacter pomeroyi DSS-3, complete genomeYeeE/YedE family protein3e-0650.4