Pre_GI: BLASTP Hits

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Query: NC_012808:1122341:1126411 Methylobacterium extorquens AM1, complete genome

Start: 1126411, End: 1127316, Length: 906

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:3119000:3133550313355031347401191Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-57223
NC_004463:5540924:5540924554092455421141191Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein6e-56218
NC_012560:3416451:3424243342424334255321290Azotobacter vinelandii DJ, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase1e-55216
NC_021150:3416450:3424242342424234255311290Azotobacter vinelandii CA6, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase1e-55216
NC_018012:1076839:1082648108264810837541107Thiocystis violascens DSM 198 chromosome, complete genomeesterase, PHB depolymerase family2e-47189
NC_013757:1212308:1237229123722912384611233Geodermatophilus obscurus DSM 43160, complete genomeesterase, PHB depolymerase family1e-44180
NC_015727:764744:7660787660787672681191Cupriavidus necator N-1 plasmid BB1p, complete sequencepoly(3-hydroxyalkanoate) depolymerase1e-43176
NC_016590:548312:5564955564955576371143Burkholderia sp. YI23 chromosome 3, complete sequenceesterase, poly(3-hydroxybutyrate) depolymerase8e-41167
NC_018681:867230:895793895793896755963Nocardia brasiliensis ATCC 700358 chromosome, complete genomeesterase, PHB depolymerase3e-1789.4
NC_012721:2021885:2044340204434020453741035Burkholderia glumae BGR1 chromosome 2, complete genomePolyhydroxybutyrate depolymerase domain protein1e-1583.6
NC_010801:238430:2442422442422453661125Burkholderia multivorans ATCC 17616 chromosome 3, completepoly(3-hydroxybutyrate) depolymerase1e-1377.8
NC_008544:55451:7076770767720321266Burkholderia cenocepacia HI2424 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like protein9e-1271.2
NC_008062:81338:9294992949942141266Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like9e-1271.2
NC_015711:2050360:205346620534662054344879Myxococcus fulvus HW-1 chromosome, complete genomePHB depolymerase family esterase4e-0962.4
NC_008314:2686851:2711012271101227121091098Ralstonia eutropha H16 chromosome 2, complete sequencePoly(3-hydroxybutyrate) depolymerase2e-0756.2
NC_013159:3423500:344169934416993442694996Saccharomonospora viridis DSM 43017, complete genomeesterase, PHB depolymerase family7e-0754.7