Pre_GI: BLASTP Hits

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Query: NC_012808:1122341:1122341 Methylobacterium extorquens AM1, complete genome

Start: 1122341, End: 1124455, Length: 2115

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:1777618:1780750178075017828642115Methylobacterium extorquens DM4, complete genomehypothetical exported protein, outer membrane receptor protein01276
NC_018645:247917:2652972652972673002004Desulfobacula toluolica Tol2, complete genomeTonB-dependent receptor9e-33142
NC_014307:533975:5487695487695508202052Ralstonia solanacearum CFBP2957 chromosome, complete genometonb-dependent receptor4e-32140
NC_015594:579354:5833305833305853121983Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeTonB-dependent receptor8e-28125
NC_014013:301184:3055593055593075441986Sphingobium japonicum UT26S chromosome 2, complete genomeTonB-dependent receptor-like protein6e-26119
NC_004347:718091:7515697515697536472079Shewanella oneidensis MR-1, complete genomeTonB-dependent receptor, putative2e-24115
NC_012968:381771:3939413939413961242184Methylotenera mobilis JLW8, complete genomeTonB-dependent receptor3e-1584
AC_000091:1521976:1522677152267715247792103Escherichia coli W3110 DNA, complete genomepredicted iron outer membrane transporter6e-1480.1
NC_010473:1607646:1609582160958216116842103Escherichia coli str. K-12 substr. DH10B, complete genomepredicted iron outer membrane transporter6e-1480.1
NC_000913:1517051:1518987151898715210892103Escherichia coli K12, complete genomepredicted iron outer membrane transporter6e-1480.1
NC_012759:1409086:1411046141104614131482103Escherichia coli BW2952 chromosome, complete genomeputative iron outer membrane transporter6e-1480.1
NC_011740:1494796:1494796149479614968982103Escherichia fergusonii ATCC 35469, complete genomeputative iron outer membrane receptor2e-1378.6
NC_011745:1581907:1583588158358815856902103Escherichia coli ED1a chromosome, complete genomeputative iron outer membrane receptor4e-1377.4
NC_008563:1577879:1579324157932415814262103Escherichia coli APEC O1, complete genomepredicted iron outer membrane transporter7e-1376.3
NC_007946:1586656:1590405159040515925072103Escherichia coli UTI89, complete genomeprobable tonB-dependent receptor YncD precursor7e-1376.3
NC_011751:1714131:1714131171413117162332103Escherichia coli UMN026 chromosome, complete genomeputative iron outer membrane receptor7e-1376.3
NC_011742:1528668:1532417153241715345192103Escherichia coli S88 chromosome, complete genomeiron outer membrane receptor7e-1376.3
NC_016616:915755:9490079490079510282022Dechlorosoma suillum PS chromosome, complete genomeouter membrane receptor protein3e-0964.3
NC_008752:3595516:3612875361287536149412067Acidovorax avenae subsp. citrulli AAC00-1, complete genomeTonB-dependent receptor1e-0862.8
NC_014540:2908912:2912893291289329153582466Burkholderia sp. CCGE1003 chromosome 2, complete sequenceTonB-dependent siderophore receptor1e-0862.4
NC_008253:296500:3201213201213222982178Escherichia coli 536, complete genomeTonB dependent outer membrane siderophore receptor4e-0860.8
NC_007947:2447635:2454117245411724562372121Methylobacillus flagellatus KT, complete genomeTonB-dependent receptor6e-0860.1
NC_011747:86000:99851998511020132163Escherichia coli S88 plasmid pECOS88, complete sequenceouter membrane receptor FepA1e-0759.3
NC_004757:2730057:2735608273560827374431836Nitrosomonas europaea ATCC 19718, complete genomeTonB-dependent receptor protein2e-0758.5
NC_015160:1467445:1467445146744514695082064Odoribacter splanchnicus DSM 20712 chromosome, complete genomeTonB-dependent receptor plug3e-0757.8
NC_013162:769915:7736757736757758162142Capnocytophaga ochracea DSM 7271, complete genomeTonB-dependent receptor plug4e-0757.4
NC_010170:4800000:4904021490402149061502130Bordetella petrii, complete genomeTonB-dependent outer membrane receptor4e-0757
NC_015224:647341:6719476719476741032157Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative iron transporter8e-0756.2
NC_006625:1:1366613666158402175Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceouter membrane receptor FepA3e-0654.3
NC_015222:1492500:1506214150621415080671854Nitrosomonas sp. AL212 chromosome, complete genomeTonB-dependent vitamin B12 receptor4e-0653.9
NC_012731:3411161:3433588343358834357622175Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeouter membrane receptor FepA5e-0653.5