Pre_GI: BLASTP Hits

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Query: NC_012779:261438:275788 Edwardsiella ictaluri 93-146, complete genome

Start: 275788, End: 276225, Length: 438

Host Lineage: Edwardsiella ictaluri; Edwardsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Edwardsiella ictaluri is the causative agent of enteric septicemia in catfish (ESC), an economically significant disease of farm-raised catfish. The acute form of ESC causes bacterial septicemia (proliferation of bacteria in the blood) which rapidly leads to death. The chronic form of this disease causes a characteristic head lesion, and may also proceed to septicemia and death. Two plasmids, which are consistently present in Edwardsiella ictaluri isolates, have been sequenced. Both plasmids contain genes for the type III secretory system, which is involved in translocating pathogenicity proteins into the eukaryotic cell.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013508:275081:292753292753293199447Edwardsiella tarda EIB202, complete genomenickel responsive regulator2e-54210
NC_012912:242709:263936263936264355420Dickeya zeae Ech1591, complete genometranscriptional regulator NikR, CopG family1e-21101
NC_008340:2272692:228003322800332280452420Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, CopG family5e-2096.3
NC_004741:4160500:418449041844904184891402Shigella flexneri 2a str. 2457T, complete genomenickel responsive regulator4e-1683.6
NC_011146:4070000:407565140756514076070420Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator, CopG family5e-1476.6
NC_010510:310938:327484327484327945462Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative transcriptional regulator, CopG family1e-1375.1
NC_019978:315346:320567320567320980414Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain1e-1065.5
NC_015680:369777:385309385309385725417Pyrococcus yayanosii CH1 chromosome, complete genometranscription nickel responsive regulator (nikR)2e-0961.2
NC_015416:2113949:213483821348382135245408Methanosaeta concilii GP-6 chromosome, complete genomeCopG family transcriptional regulator3e-0960.5
NC_013156:728397:748013748013748438426Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family4e-0856.6
NC_000868:1386592:139771213977121398128417Pyrococcus abyssi GE5, complete genomenickel responsive regulator4e-0856.6
NC_000909:467607:485578485578486003426Methanocaldococcus jannaschii DSM 2661, complete genomenickel responsive regulator7e-0856.2
NC_019942:987134:103530410353041035708405Aciduliprofundum sp. MAR08-339, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain1e-0755.5
NC_008212:2978786:299626729962672996806540Haloquadratum walsbyi DSM 16790, complete genometranscription regulator; probably nickel responsive regulator2e-0754.7
NC_003552:2133590:215101021510102151447438Methanosarcina acetivorans C2A, complete genometranscriptional regulator, CopG family2e-0754.7
NC_019940:3089884:310346431034643103886423Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator6e-0753.1
NC_007355:2838952:285914428591442859569426Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetranscriptional regulator, CopG family1e-0651.6