Pre_GI: BLASTP Hits

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Query: NC_012668:3037345:3051655 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 3051655, End: 3052539, Length: 885

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:89500:971099710997930822Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-155548
NC_011386:3723019:20620622632058Oligotropha carboxidovorans OM5, complete genomehypothetical protein2e-96352
NC_007925:3933765:3950567395056739526182052Rhodopseudomonas palustris BisB18, complete genomehypothetical protein2e-87322
NC_015186:2908387:2910505291050529125502046Acidiphilium multivorum AIU301, complete genomehypothetical protein4e-65248
NC_010410:3606826:367497536749753675871897Acinetobacter baumannii AYE, complete genome2e-54212
NC_016027:2446806:2463166246316624652772112Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein6e-52204
NC_011365:1171536:1197201119720111993122112Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein3e-51202
NC_010125:1538335:1552113155211315542242112Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein2e-50199
NC_015556:2265940:2284506228450622864551950Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein7e-48191
NC_006526:1976779:1998005199800519992641260Zymomonas mobilis subsp. mobilis ZM4, complete genomeVirD2 components relaxase9e-47187
NC_010943:1332243:1345632134563213475961965Stenotrophomonas maltophilia K279a, complete genomehypothetical protein4e-44178
NC_009719:1972545:1973557197355719755421986Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein5e-42171
NC_014500:842493:8679708679708699371968Dickeya dadantii 3937 chromosome, complete genomeVirD2 components relaxase5e-42171
NC_008577:1455000:1481079148107914830521974Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-40167
NC_015381:2859000:2890870289087028928311962Burkholderia gladioli BSR3 chromosome 1, complete sequencetype IV secretory pathway VirD2 component1e-40166
NC_007802:3575739:3580699358069935827832085Jannaschia sp. CCS1, complete genomehypothetical protein2e-40166
NC_003295:2787371:2804432280443228064832052Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL/UNKNOWN PROTEIN5e-39161
NC_008752:725189:7501817501817521691989Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-38160
NC_011992:3752867:3773366377336637753331968Acidovorax ebreus TPSY, complete genomehypothetical protein1e-37157
NC_014910:242845:2601642601642621461983Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-37156
NC_011662:2320100:235038623503862351012627Thauera sp. MZ1T, complete genome2e-36153
NC_017387:247462:289577289577290188612Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomehypothetical protein6e-35148
NC_010170:4800000:4824978482497848269391962Bordetella petrii, complete genomeprobable conjugal transfer protein VirD22e-33143
NC_014006:344331:3584373584373605002064Sphingobium japonicum UT26S chromosome 1, complete genometype IV secretory pathway VirD2 component2e-33142
NC_010125:381711:4023154023154040541740Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein9e-33140
NC_014834:959986:9609979609979627361740Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV secretory pathway VirD2 component2e-30133
NC_007643:955362:9709319709319727421812Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein8e-30130
NC_009720:4406991:4436904443690444386431740Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-28127
NC_011365:1135750:1157246115724611590001755Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein1e-28127
NC_011365:1865687:186676018667601867389630Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome2e-28126
NC_017249:18493:3932339323404981176Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-28125
NC_004463:18497:3932939329412031875Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein3e-28125
NC_008686:1472899:1472899147289914746531755Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein6e-28124
NC_010338:2443765:2446096244609624478171722Caulobacter sp. K31, complete genomehypothetical protein4e-25115
NC_016027:2512297:2516500251650025182421743Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein3e-23108
NC_014100:2782000:2797176279717627988821707Caulobacter segnis ATCC 21756 chromosome, complete genomehypothetical protein7e-23107
NC_017249:3119000:312451831245183125219702Bradyrhizobium japonicum USDA 6, complete genometransposase2e-20100
NC_012791:2233098:2233098223309822348101713Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein2e-1892.8
NC_012982:711122:7261567261567280961941Hirschia baltica ATCC 49814, complete genomehypothetical protein6e-1891.7
NC_014414:2540189:2544170254417025461071938Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein1e-1274.3
NC_011059:670345:6729736729736749041932Prosthecochloris aestuarii DSM 271, complete genomehypothetical protein2e-0963.5