Pre_GI: BLASTP Hits

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Query: NC_012668:3037345:3047352 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 3047352, End: 3047546, Length: 195

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017162:270460:281771281771282754984Acinetobacter baumannii 1656-2 chromosome, complete genomeStrA4e-27120
NC_003384:157158:166864166864167667804Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidstreptomycin phosphotransferase6e-27119
NC_010545:1781393:179421317942131795016804Corynebacterium urealyticum DSM 7109, complete genomeaminoglycoside-3''-phosphotransferase6e-27119
NC_012668:3037345:304332230433223044125804Vibrio cholerae MJ-1236 chromosome 1, complete sequenceaminoglycoside 3'-phosphotransferase6e-27119
NC_013365:92973:108704108704109507804Escherichia coli O111:H- str. 11128 plasmid pO111_1, completestreptomycin phosphotransferase6e-27119
NC_016445:89500:101153101153101956804Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeaminoglycoside resistance protein A6e-27119
NC_017162:270460:288687288687289532846Acinetobacter baumannii 1656-2 chromosome, complete genomeStrA6e-27119
NC_017171:280762:291080291080291925846Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomehypothetical protein6e-27119
NC_017387:247462:293103293103293948846Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomestreptomycin 3''-kinase6e-27119
NC_010410:3606826:367965636796563680492837Acinetobacter baumannii AYE, complete genomeStreptomycin 3''-kinase (Streptomycin 3''-phosphotransferase) (Streptomycin 6-phosphotransferase) (Streptomycin 6-kinase)1e-26118
NC_013947:4363250:437218543721854373006822Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3''-kinase6e-1579.7
NC_013595:7302888:730930773093077310128822Streptosporangium roseum DSM 43021, complete genome3''-kinase4e-1167
NC_015379:4630367:463418746341874634540354Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative Kanamycin kinase2e-0858.2
NC_015161:2018493:204445020444502045232783Deinococcus proteolyticus MRP chromosome, complete genomeaminoglycoside phosphotransferase4e-0753.1
NC_009667:1371924:139639213963921397192801Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceaminoglycoside phosphotransferase2e-0651.2
NC_016582:1707756:172599417259941726467474Streptomyces bingchenggensis BCW-1 chromosome, complete genomephosphotransferase7e-0649.3