Pre_GI: BLASTP Hits

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Query: NC_012667:703852:732436 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 732436, End: 734211, Length: 1776

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006371:1997954:2013044201304420148611818Photobacterium profundum SS9 chromosome 2, complete sequencepolyhydroxyalkanoic acid synthase0860
NC_015186:1504275:1524607152460715264061800Acidiphilium multivorum AIU301, complete genomepoly(3-hydroxyalkanoate) polymerase2e-146520
NC_009484:1434000:1454416145441614562151800Acidiphilium cryptum JF-5 chromosome, complete genomepoly(R)-hydroxyalkanoic acid synthase2e-146520
NC_016026:997225:1029443102944310312931851Micavibrio aeruginosavorus ARL-13 chromosome, complete genomepoly(R)-hydroxyalkanoic acid synthase, class I family protein2e-142506
NC_008340:480399:4975814975814993651785Alkalilimnicola ehrlichei MLHE-1, complete genomepoly(R)-hydroxyalkanoic acid synthase, class I3e-136485
NC_008347:1636660:1660470166047016625032034Maricaulis maris MCS10, complete genomepoly(R)-hydroxyalkanoic acid synthase, class I8e-131468
NC_007298:1721425:1724507172450717262881782Dechloromonas aromatica RCB, complete genomePoly(R)-hydroxyalkanoic acid synthase, class I5e-125448
NC_008702:1094663:1096743109674310984851743Azoarcus sp. BH72, complete genomeprobable polyhydroxyalkanoate synthase2e-124446
NC_010625:1370462:1370462137046213721561695Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencepoly(R)-hydroxyalkanoic acid synthase, class I2e-121436
NC_009049:2131017:2158072215807221598771806Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencepoly(R)-hydroxyalkanoic acid synthase, class I8e-121434
NC_008786:4216152:4216152421615242178521701Verminephrobacter eiseniae EF01-2, complete genomepoly(R)-hydroxyalkanoic acid synthase, class I9e-117421
NC_012560:2348202:2367229236722923689321704Azotobacter vinelandii DJ, complete genomePHB synthase1e-112407
NC_021150:2348214:2367241236724123689441704Azotobacter vinelandii CA6, complete genomePHB synthase1e-112407
NC_000963:1024000:1028290102829010300441755Rickettsia prowazekii str. Madrid E, complete genomePOLY-BETA-HYDROXYBUTYRATE POLYMERASE (phbC2)7e-111401
NC_017049:1022000:1026559102655910283131755Rickettsia prowazekii str. Chernikova chromosome, complete genomepoly(3-hydroxyalkanoate) synthetase7e-111401
NC_017050:1024000:1028209102820910299631755Rickettsia prowazekii str. Katsinyian chromosome, complete genomepoly(3-hydroxyalkanoate) synthetase7e-111401
NC_017056:995500:1028200102820010299541755Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomepoly(3-hydroxyalkanoate) synthetase7e-111401
NC_017048:225980:2587122587122604661755Rickettsia prowazekii str. GvV257 chromosome, complete genomepoly(3-hydroxyalkanoate) synthetase6e-111401
NC_017057:1024000:1028866102886610306201755Rickettsia prowazekii str. RpGvF24 chromosome, complete genomepoly(3-hydroxyalkanoate) synthetase6e-111401
NC_010511:2163570:2180553218055321824871935Methylobacterium sp. 4-46 chromosome, complete genomepoly(R)-hydroxyalkanoic acid synthase3e-109395
NC_015593:2103815:2103815210381521055601746Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completepoly(R)-hydroxyalkanoic acid synthase class I2e-108393
NC_012559:1064821:1079621107962110811651545Laribacter hongkongensis HLHK9, complete genomePhaC4e-108392
NC_008702:1432952:1467151146715114688841734Azoarcus sp. BH72, complete genomeprobable poly-beta-hydroxybutyrate synthase1e-104380
NC_012587:3613162:3627421362742136292531833Rhizobium sp. NGR234, complete genomepoly-beta-hydroxybutyrate polymerase domain protein1e-96354
NC_009485:8138314:8164056816405681655851530Bradyrhizobium sp. BTAi1 chromosome, complete genomepoly(3-hydroxyalkanoate) polymerase family protein2e-92340
NC_014910:2930860:2944110294411029458671758Alicycliphilus denitrificans BC chromosome, complete genomepoly-beta-hydroxybutyrate polymerase domain protein1e-90334
NC_012691:2614603:2704688270468827064391752Tolumonas auensis DSM 9187, complete genomePoly-beta-hydroxybutyrate polymerase domain protein7e-89328
NC_015186:2165628:2170007217000721717281722Acidiphilium multivorum AIU301, complete genomepoly(3-hydroxyalkanoate) polymerase8e-84311
NC_019673:3607958:3637519363751936390391521Saccharothrix espanaensis DSM 44229 complete genomePoly-hydroxyalkanoic acid synthase3e-78293
NC_014735:1:2276022760241001341Halogeometricum borinquense DSM 11551 plasmid pHBOR01, completepoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit2e-29130
NC_010175:4375265:4375265437526543763711107Chloroflexus aurantiacus J-10-fl, complete genomealpha/beta hydrolase fold-containing protein9e-23108
NC_012032:4385311:4385311438531143864171107Chloroflexus sp. Y-400-fl, complete genomealpha/beta hydrolase fold protein9e-23108
NC_010511:871905:8934888934888945941107Methylobacterium sp. 4-46 chromosome, complete genomepoly(R)-hydroxyalkanoic acid synthase subunit PhaC2e-22107
NC_008346:1431051:1434066143406614351571092Syntrophomonas wolfei subsp. wolfei str. Goettingen, completepoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit1e-1792
NC_010125:3393368:339592733959273396913987Gluconacetobacter diazotrophicus PAl 5, complete genomeputative poly-beta-hydroxybutyrate polymerase1e-1275.5