Pre_GI: BLASTP Hits

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Query: NC_012667:46432:66532 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 66532, End: 66978, Length: 447

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008740:2905990:293247529324752933425951Marinobacter aquaeolei VT8, complete genomediguanylate cyclase8e-35145
NC_017506:2504746:250701425070142507967954Marinobacter adhaerens HP15 chromosome, complete genomesensory box/GGDEF family protein8e-34142
NC_018868:4174794:419154141915414192494954Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomediguanylate cyclase1e-24111
NC_009075:3113393:311339331133933114328936Burkholderia pseudomallei 668 chromosome II, complete sequencediguanylate cyclase4e-22103
NC_006351:3159630:315869831586983159633936Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein4e-22103
NC_006349:2311817:231088523108852311820936Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceGGDEF domain protein4e-22103
NC_008784:1151305:115130511513051152240936Burkholderia mallei SAVP1 chromosome I, complete sequencediguanylate cyclase4e-22103
NC_007435:1825741:182480918248091825744936Burkholderia pseudomallei 1710b chromosome II, complete sequenceGGDEF domain protein4e-22103
NC_007650:2901751:290081929008192901754936Burkholderia thailandensis E264 chromosome II, complete sequenceGGDEF domain protein1e-21102
NC_004347:2668000:2679073267907326803621290Shewanella oneidensis MR-1, complete genomesensor histidine kinase6e-1166.2
NC_010337:1999405:2018951201895120206541704Heliobacterium modesticaldum Ice1, complete genomesignal transduction histidine kinase2e-0857.8